Content area

Abstract

Chuzan virus (CHUV) belongs to the Palyam serogroup, causes bovine congenital disease, and is prevalent in Asia. To date, only one full Palyam virus (PALV) genome sequence, that of Japanese CHUV strain K47, has been reported. Sequence analysis indicates that PALV strains isolated from different geographical regions show significant diversity, which is mainly shaped by geographically independent evolution and genetic reassortment. Our understanding of the genetic characteristics of PALV is hampered by a very limited genomic sequence database. In this study, we report the complete genome sequence of CHUV strain SZ187, which was isolated for the first time in 2012 in mainland China. Sequence alignment and phylogenetic analysis demonstrate that SZ187 is closely related to other CHUV strains isolated in Taiwan and Japan, indicating that they may share a common ancestor. This new full-length CHUV genome sequence could help in the design of broader assays for epidemiological studies and facilitate the identification of new CHUV isolates in the future.

Details

Title
Complete genome sequence of a Chuzan virus strain isolated for the first time in mainland China
Author
Yang, Heng; Xiao, Lei; Meng, Jinxing; Xiong, Heli; Gao, Lin; Liao, Defang; Li, Huachun
Pages
1073-1077
Publication year
2016
Publication date
Apr 2016
Publisher
Springer Nature B.V.
ISSN
03048608
e-ISSN
14328798
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
1776779233
Copyright
Springer-Verlag Wien 2016