Abstract

The Lennard-Jones (LJ) potential is a cornerstone of Molecular Dynamics (MD) simulations and among the most widely used computational kernels in science. The LJ potential models atomistic attraction and repulsion with century old prescribed parameters (q = 6, p = 12, respectively), originally related by a factor of two for simplicity of calculations. We propose the inference of the repulsion exponent through Hierarchical Bayesian uncertainty quantification We use experimental data of the radial distribution function and dimer interaction energies from quantum mechanics simulations. We find that the repulsion exponent p ≈ 6.5 provides an excellent fit for the experimental data of liquid argon, for a range of thermodynamic conditions, as well as for saturated argon vapour. Calibration using the quantum simulation data did not provide a good fit in these cases. However, values p ≈ 12.7 obtained by dimer quantum simulations are preferred for the argon gas while lower values are promoted by experimental data. These results show that the proposed LJ 6-p potential applies to a wider range of thermodynamic conditions, than the classical LJ 6-12 potential. We suggest that calibration of the repulsive exponent in the LJ potential widens the range of applicability and accuracy of MD simulations.

Details

Title
Data driven inference for the repulsive exponent of the Lennard-Jones potential in molecular dynamics simulations
Author
Kulakova, Lina 1 ; Arampatzis, Georgios 1 ; Angelikopoulos, Panagiotis 2   VIAFID ORCID Logo  ; Hadjidoukas, Panagiotis 1 ; Papadimitriou, Costas 3 ; Koumoutsakos, Petros 1   VIAFID ORCID Logo 

 Computational Science and Engineering Laboratory, Clausiusstrasse 33, ETH Zürich, Switzerland 
 Computational Science and Engineering Laboratory, Clausiusstrasse 33, ETH Zürich, Switzerland; D.E.Shaw Research LLC, New York, USA 
 Department of Mechanical Engineering, University of Thessaly, Pedion Areos, Greece 
Pages
1-10
Publication year
2017
Publication date
Nov 2017
Publisher
Nature Publishing Group
e-ISSN
20452322
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
1970283875
Copyright
© 2017. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.