Abstract

The type-V CRISPR effector Cas12b (formerly known as C2c1) has been challenging to develop for genome editing in human cells, at least in part due to the high temperature requirement of the characterized family members. Here we explore the diversity of the Cas12b family and identify a promising candidate for human gene editing from Bacillus hisashii, BhCas12b. However, at 37 °C, wild-type BhCas12b preferentially nicks the non-target DNA strand instead of forming a double strand break, leading to lower editing efficiency. Using a combination of approaches, we identify gain-of-function mutations for BhCas12b that overcome this limitation. Mutant BhCas12b facilitates robust genome editing in human cell lines and ex vivo in primary human T cells, and exhibits greater specificity compared to S. pyogenes Cas9. This work establishes a third RNA-guided nuclease platform, in addition to Cas9 and Cpf1/Cas12a, for genome editing in human cells.

The Cas12b family of CRISPR nucleases has been underutilized in mammalian cells due to the high temperature requirement of known members. Here the authors engineer BhCas12b to overcome this limitation for robust and specific genome editing applications in human cells.

Details

Title
Engineering of CRISPR-Cas12b for human genome editing
Author
Strecker, Jonathan 1 ; Jones, Sara 1 ; Koopal Balwina 1   VIAFID ORCID Logo  ; Schmid-Burgk, Jonathan 1 ; Zetsche Bernd 1 ; Gao Linyi 1   VIAFID ORCID Logo  ; Makarova, Kira S 2 ; Koonin, Eugene V 2   VIAFID ORCID Logo  ; Zhang, Feng 1 

 Howard Hughes Medical Institute, Cambridge, USA (GRID:grid.413575.1) (ISNI:0000 0001 2167 1581) ; Broad Institute of MIT and Harvard, Cambridge, USA (GRID:grid.66859.34) ; McGovern Institute for Brain Research, Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, USA (GRID:grid.116068.8) (ISNI:0000 0001 2341 2786) ; Department of Brain and Cognitive Sciences, Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, USA (GRID:grid.116068.8) (ISNI:0000 0001 2341 2786) ; Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, USA (GRID:grid.116068.8) (ISNI:0000 0001 2341 2786) 
 National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, USA (GRID:grid.419234.9) (ISNI:0000 0004 0604 5429) 
Publication year
2019
Publication date
Jan 2019
Publisher
Nature Publishing Group
e-ISSN
20411723
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
2169815594
Copyright
This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.