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Abstract
Aminoacyl-tRNA synthetases (ARSs) function to transfer amino acids to cognate tRNA molecules, which are required for protein translation. To date, biallelic mutations in 31 ARS genes are known to cause recessive, early-onset severe multi-organ diseases. VARS encodes the only known valine cytoplasmic-localized aminoacyl-tRNA synthetase. Here, we report seven patients from five unrelated families with five different biallelic missense variants in VARS. Subjects present with a range of global developmental delay, epileptic encephalopathy and primary or progressive microcephaly. Longitudinal assessment demonstrates progressive cortical atrophy and white matter volume loss. Variants map to the VARS tRNA binding domain and adjacent to the anticodon domain, and disrupt highly conserved residues. Patient primary cells show intact VARS protein but reduced enzymatic activity, suggesting partial loss of function. The implication of VARS in pediatric neurodegeneration broadens the spectrum of human diseases due to mutations in tRNA synthetase genes.
Valyl-tRNA synthetase (VARS) charges valyl-tRNA with the amino acid valine, required for translation. Here, the authors describe a progressive epileptic encephalopathy in individuals from five families carrying biallelic mutations in the VARS gene that leave the enzyme activity partially intact.
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1 University of California San Diego, Department of Neurosciences, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); Rady Children’s Hospital, Division of Child Neurology, San Diego, USA (GRID:grid.286440.c) (ISNI:0000 0004 0383 2910); University of California San Diego, Department of Pediatrics, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); Rady Children’s Hospital, Rady Children’s Institute for Genomic Medicine, San Diego, USA (GRID:grid.286440.c) (ISNI:0000 0004 0383 2910)
2 Metabolic Unit, Amsterdam UMC (University Medical Centers), Vrije Universiteit Amsterdam, Department of Clinical Chemistry, Amsterdam, The Netherlands (GRID:grid.12380.38) (ISNI:0000 0004 1754 9227); Gastroenterology & Metabolism Amsterdam Neuroscience, Amsterdam, The Netherlands (GRID:grid.484519.5)
3 National Research Centre, Department of Clinical Genetics, Cairo, Egypt (GRID:grid.419725.c) (ISNI:0000 0001 2151 8157)
4 University of California San Diego, Department of Neurosciences, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); Howard Hughes Medical Institute, University of California, San Diego, Department of Neurosciences, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242)
5 Rady Children’s Hospital, Rady Children’s Institute for Genomic Medicine, San Diego, USA (GRID:grid.286440.c) (ISNI:0000 0004 0383 2910)
6 University of California San Diego, Department of Pediatrics, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); Rady Children’s Hospital, Rady Children’s Institute for Genomic Medicine, San Diego, USA (GRID:grid.286440.c) (ISNI:0000 0004 0383 2910)
7 University of California San Diego, Department of Neurosciences, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); Rady Children’s Hospital, Division of Child Neurology, San Diego, USA (GRID:grid.286440.c) (ISNI:0000 0004 0383 2910); University of California San Diego, Department of Pediatrics, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242)
8 Howard Hughes Medical Institute, University of California, San Diego, Department of Neurosciences, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242)
9 Hong Kong University of Science and Technology, IAS HKUST-Scripps R&D Laboratory, Institute for Advanced Study, Kowloon, China (GRID:grid.24515.37) (ISNI:0000 0004 1937 1450)
10 Hong Kong University of Science and Technology, IAS HKUST-Scripps R&D Laboratory, Institute for Advanced Study, Kowloon, China (GRID:grid.24515.37) (ISNI:0000 0004 1937 1450); The Landmark, Pangu Biopharma, Edinburgh Tower, Hong Kong, China (GRID:grid.24515.37)
11 Pediatrics and Human Genetics, McGill University, Departments of Neurology and Neurosurgery, Montreal, Canada (GRID:grid.14709.3b) (ISNI:0000 0004 1936 8649); IRCCS Istituto Giannina Gaslini, Genova, Italy (GRID:grid.419504.d) (ISNI:0000 0004 1760 0109)
12 Pediatrics and Human Genetics, McGill University, Departments of Neurology and Neurosurgery, Montreal, Canada (GRID:grid.14709.3b) (ISNI:0000 0004 1936 8649); Montreal Children’s Hospital, McGill University Health Center, Division of Medical Genetics, Montreal, Canada (GRID:grid.14709.3b); Research Institute of the McGill University Health Center, Child Health and Human Development Program, Montreal, Canada (GRID:grid.63984.30) (ISNI:0000 0000 9064 4811)
13 Alexandria University, Department of Pediatrics, Alexandria, Egypt (GRID:grid.7155.6) (ISNI:0000 0001 2260 6941)
14 Department of Pediatrics, Hamad Medical Corporation, Clinical and Metabolic Genetics, Doha, Qatar (GRID:grid.413548.f) (ISNI:0000 0004 0571 546X)
15 University of California San Diego, Department of Neurosciences, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); Rady Children’s Hospital, Division of Child Neurology, San Diego, USA (GRID:grid.286440.c) (ISNI:0000 0004 0383 2910); University of California San Diego, Department of Pediatrics, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); Rady Children’s Hospital, Rady Children’s Institute for Genomic Medicine, San Diego, USA (GRID:grid.286440.c) (ISNI:0000 0004 0383 2910); Howard Hughes Medical Institute, University of California, San Diego, Department of Neurosciences, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242)