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Abstract

We introduce Sleep, a new Python open-source graphical user interface (GUI) dedicated to visualization, scoring and analyses of sleep data. Among its most prominent features are: 1) Dynamic display of polysomnographic data, spectrogram, hypnogram and topographic maps with several customizable parameters, 2) Implementation of several automatic detection of sleep features such as spindles, K-complexes, slow waves and rapid eye movements, 3) Implementation of practical signal processing tools such as re-referencing or filtering, and 4) Display of main descriptive statistics including publication-ready tables and figures. The software package supports loading and reading raw EEG data from a standard file formats such as European Data Format, in addition to a range of commercial data formats. Most importantly, Sleep is built on top of the VisPy library, which provides GPU-based fast and high-level visualization. As a result, it is capable of efficiently handling and displaying large sleep datasets. Sleep is freely available (http://visbrain.org/sleep) and comes with sample datasets and an extensive documentation. Novel functionalities will continue to be added and open-science community efforts are expected to enhance the capacities of this module.

Details

1009240
Title
Sleep: An Open-Source Python Software for Visualization, Analysis, and Staging of Sleep Data
Publication title
Publication year
2017
Publication date
Sep 21, 2017
Section
Methods ARTICLE
Publisher
Frontiers Research Foundation
Place of publication
Lausanne
Country of publication
Switzerland
e-ISSN
16625196
Source type
Scholarly Journal
Language of publication
English
Document type
Journal Article
Publication history
 
 
Online publication date
2017-09-06
Milestone dates
2017-07-03 (Received); 2017-09-06 (Accepted); 2017-09-21 (Published)
Publication history
 
 
   First posting date
06 Sep 2017
ProQuest document ID
2294106645
Document URL
https://www.proquest.com/scholarly-journals/sleep-open-source-python-software-visualization/docview/2294106645/se-2?accountid=208611
Copyright
© 2017. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Last updated
2023-11-24
Database
ProQuest One Academic