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Abstract
Here, we describe a new immersion-based clearing method suitable for optical clearing of thick adult human brain samples while preserving its lipids and lipophilic labels such as 1,1′-dioctadecyl-3,3,3′,3′-tetramethylindocarbocyanine perchlorate (DiI). This clearing procedure is simple, easy to implement, and allowed for clearing of 5 mm thick human brain tissue samples within 12 days. Furthermore, we show for the first time the advantageous effect of the Periodate-Lysine-Paraformaldehyde (PLP) fixation as compared to the more commonly used 4% paraformaldehyde (PFA) on clearing performance.
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Details

1 Department of Cognitive Neuroscience, Faculty of Psychology & Neuroscience, Maastricht University, Maastricht, the Netherlands (GRID:grid.5012.6) (ISNI:0000 0001 0481 6099)
2 Department of Systemic Neurophysiology, Technische Universität Darmstadt, Darmstadt, Germany (GRID:grid.6546.1) (ISNI:0000 0001 0940 1669)
3 Johann Wolfgang Goethe-Universität Frankfurt am Main, Faculty 15 Biological Sciences, Institute for Cell Biology and Neuroscience, Buchmann Institute for Molecular Life Sciences, Frankfurt am Main, Germany (GRID:grid.7839.5) (ISNI:0000 0004 1936 9721)
4 Johann Wolfgang Goethe-Universität Frankfurt am Main, Institute for Forensic Medicine, Frankfurt am Main, Germany (GRID:grid.7839.5) (ISNI:0000 0004 1936 9721)