Abstract

Tepary bean (Phaseolus acutifolis A. Gray), native to the Sonoran Desert, is highly adapted to heat and drought. It is a sister species of common bean (Phaseolus vulgaris L.), the most important legume protein source for direct human consumption, and whose production is threatened by climate change. Here, we report on the tepary genome including exploration of possible mechanisms for resilience to moderate heat stress and a reduced disease resistance gene repertoire, consistent with adaptation to arid and hot environments. Extensive collinearity and shared gene content among these Phaseolus species will facilitate engineering climate adaptation in common bean, a key food security crop, and accelerate tepary bean improvement.

In contrast to common bean, tepary bean is highly adapted to heat and drought. Here, the authors assemble the genomes of tepary bean landrace and wild accession, discuss the possible mechanism for resilience to heat stress, and reveal a reduced disease resistance gene repertoire.

Details

Title
The tepary bean genome provides insight into evolution and domestication under heat stress
Author
Moghaddam, Samira Mafi 1 ; Atena, Oladzad 2 ; Koh Chushin 3 ; Ramsay, Larissa 4 ; Hart, John P 5   VIAFID ORCID Logo  ; Mamidi Sujan 6   VIAFID ORCID Logo  ; Hoopes, Genevieve 7   VIAFID ORCID Logo  ; Sreedasyam Avinash 6   VIAFID ORCID Logo  ; Wiersma, Andrew 1 ; Zhao, Dongyan 7   VIAFID ORCID Logo  ; Grimwood, Jane 8   VIAFID ORCID Logo  ; Hamilton, John P 7   VIAFID ORCID Logo  ; Jenkins, Jerry 8   VIAFID ORCID Logo  ; Vaillancourt Brieanne 7   VIAFID ORCID Logo  ; Wood, Joshua C 7   VIAFID ORCID Logo  ; Schmutz, Jeremy 8   VIAFID ORCID Logo  ; Kagale Sateesh 9 ; Porch, Timothy 10   VIAFID ORCID Logo  ; Bett, Kirstin E 4   VIAFID ORCID Logo  ; Robin, Buell C 11   VIAFID ORCID Logo  ; McClean, Phillip E 2   VIAFID ORCID Logo 

 Michigan State University, Department of Plant Biology, East Lansing, USA (GRID:grid.17088.36) (ISNI:0000 0001 2150 1785); Michigan State University, Plant Resilience Institute, East Lansing, USA (GRID:grid.17088.36) (ISNI:0000 0001 2150 1785) 
 North Dakota State University, Department of Plant Sciences and Genomics and Bioinformatics Program, Fargo, USA (GRID:grid.261055.5) (ISNI:0000 0001 2293 4611) 
 University of Saskatchewan, Department of Plant Sciences, Saskatoon, Canada (GRID:grid.25152.31) (ISNI:0000 0001 2154 235X); University of Saskatchewan, Global Institute for Food Security (GIFS), Saskatoon, Canada (GRID:grid.25152.31) (ISNI:0000 0001 2154 235X) 
 University of Saskatchewan, Department of Plant Sciences, Saskatoon, Canada (GRID:grid.25152.31) (ISNI:0000 0001 2154 235X) 
 USDA-ARS-Tropical Agriculture Research Station, Mayaguez, USA (GRID:grid.25152.31) 
 HudsonAlpha Institute for Biotechnology, Huntsville, USA (GRID:grid.417691.c) (ISNI:0000 0004 0408 3720) 
 Michigan State University, Department of Plant Biology, East Lansing, USA (GRID:grid.17088.36) (ISNI:0000 0001 2150 1785) 
 HudsonAlpha Institute for Biotechnology, Huntsville, USA (GRID:grid.417691.c) (ISNI:0000 0004 0408 3720); Lawrence Berkeley National Laboratory, US Department of Energy Joint Genome Institute, Berkeley, USA (GRID:grid.184769.5) (ISNI:0000 0001 2231 4551) 
 National Research Council Canada, Saskatoon, Canada (GRID:grid.24433.32) (ISNI:0000 0004 0449 7958) 
10  USDA-ARS-Tropical Agriculture Research Station, Mayaguez, USA (GRID:grid.24433.32) 
11  Michigan State University, Department of Plant Biology, East Lansing, USA (GRID:grid.17088.36) (ISNI:0000 0001 2150 1785); Michigan State University, Plant Resilience Institute, East Lansing, USA (GRID:grid.17088.36) (ISNI:0000 0001 2150 1785); Michigan State University AgBioResearch, East Lansing, USA (GRID:grid.17088.36) (ISNI:0000 0001 2150 1785) 
Publication year
2021
Publication date
2021
Publisher
Nature Publishing Group
e-ISSN
20411723
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
2525229492
Copyright
© The Author(s) 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.