1. Introduction
In the past few years, host-virus dynamics models have been developed to explain the interactions between virus and target T cells, much attention has been given to the role of the immune response to human immunodeficiency virus (HIV) infection. Many different mechanisms of immune system, defenses against viral infections are of interest because lots of the diseases caused by them, e.g., hepatitis B and AIDS, are chronic and incurable [1,2]. With the new coronavirus epidemic rages around the world [3,4,5], virus dynamics has become a hot spot again. In the immune response mechanism in vivo for viral infections, the cytotoxic T lymphocyte () plays a particularly important role, therefore many authors have examined various dynamics.
A virus must take over host cells and use them to replicate because it can not replicate on its own. HIV targets the cells, often referred to as “helper” T cells, when it invades the body. These cells can be considered “messengers”, or the command centres of the immune system. They send signal to other immune cells that an invader is to be fought. Once invaded by the viruses, these infected cells will cause a cytotoxic T-lymphocyte () response from the immune system. The immune response cells, or cytotoxic lymphocytes, respond to this message and set out to eliminate infection by killing infected cells. Through the lysis of the infected cells, the viruses are prevented from further replication [2]. The response is also striking in that it sometime does damage to the body when it tries to clear the virus. Over half the tissue damage caused by hepatitis is actually caused by the response [1,6].
If the immune system is functioning normally, these components work together efficiently and an infection is eliminated quickly, causing only temporary discomfort to the host. However, over time HIV is able to deplete the population of cells. What remains unknown is the exact mechanism by which this occurs, but several models have been suggested. For a variety of different hypotheses of how this occurs, we refer the reader to papers [7,8,9]. The natural killer cells may be fit to eliminate infection, but they are never deployed, which is the the impact of the depletion of cells on the host. This then culminates in a clinical problem wherein the patient becomes vulnerable to infections that a healthy immune system would normally handle.
Quite a lot of mathematical models of HIV have been set up. The classical model is a system with three ordinary differential equations [10,11]. To better understanding the dynamics of these infections, many mathematical models have been proposed by using different kinds of differential equations, see [12,13,14,15,16] and references therein. For example, Yang et al. [15] studied the following model
(1)
where and denote the densities of uninfected cells, infected cells and free virus cells at position x at time t, respectively. stands for the recruitment rate of the uninfected cells; is the virus-to-cell infection rate; and represent death rates of uninfected cells, infected cells and free viruses; stands for the recruitment rate for free viruses; d stands for the diffusion coefficient and is the Laplacian operator.To help the body heal, cytotoxic T-lymphocyte effectors () of the immune system will remove the infected cells to prevent further viral replications. To model these extra dynamics, researchers have studied the model of viral interaction with response [10,17]
(2)
where variables and z denote the density of the healthy cells, the infected cells, and the populations, respectively. Healthy cells are produced at rate and their natural mortality is ; these cells may come into contact with the virus and become infected cells at rate , infected cells’s natural mortality is , and they are removed by at rate ; the population increases at the rate and they are removed at the rate .In [18,19], researchers studied a mathematical model for HIV-1 infection with both intracellular delay and cell-mediated immune response:
(3)
Researchers obtain the global stability of the infection-free equilibrium and give many conditions for the local stability of the two infection equilibria: one without being activated and the other with. There are many references in the dynamics of HIV-1 infection with response (see, e.g., [17,20,21,22] and the references therein).
However, there is no diffusion term and only one delay in (3). As we know, the virus is not stationary in space, the movement of the virus in space leads to the spatial spread of the disease, and mostly with general nonlinear incidence rate. Fickian diffusion can reasonably describe the spread of this virus in space and this diffusion process is often represented by the Laplace operator. Inspired by [16,23], in this paper, we extend the classic model of virus dynamics to a diffusive infection model with intracellular delay and cell-mediated immune response, with two delays and general nonlinear incidence rate, as follows
(4)
here and stand for the densities of uninfected cells, infected cells, virus cells and at position x at time t, respectively. and denote the natural produce and mortality rate of uninfected cells, and uninfected cells are infected with a rate ; and is the virus-to-cell infection rate; and is the virus-to-cell infection rate; the natural mortality rate of the infected cells are and are killed by with a rate (Note that reflects the combined effects of natural death rate of uninfected cells, , and any additional cytotoxic effects the virus may have); represents the death rate for infected but not yet virus-producing cells, represents the latent delay, i.e., the time period from being infected to becoming productive infected cells. Therefore, the probability of surviving from time to time t is ; the probability of survival of immature virus is denoted by and the average life time of an immature virus is ; where represents the time necessary for the newly produced virus to become mature; D is the diffusion coefficient and is the Laplacian operator; is the recruitment rate for free viruses. Virus particles are removed from the system at rate ; q stands for the responsiveness and denotes decay rate for in the absence of stimulation.Here, the incidences are assumed to be the nonlinear responses to the concentrations of virus particles and infected cells, using the forms and , where and are the force of infection by virus particles and infected cells and satisfy the following properties [24]:
It follows from and the Mean Value Theorem that
Epidemiologically, condition implies that: the disease cannot spread if there is no infection; the incidences and become faster when the densities of the virus particles and infected cells increase; the per capita infection rates by virus particles and infected cells will slow down as certain inhibiting effect since implies that and . The incidence rate with condition contains the bilinear and the saturation incidences.
In this paper, we will consider the system (4) with initial conditions
(5)
and homogeneous Neumann boundary conditions(6)
where and is a bounded domain in with smooth boundary , and stands for the outward normal derivative on .Usually, the exact solution for a system as (1) is difficult or even impossible to be determined. Hence, researchers seek numerical ones instead. However, how to choose the proper discrete scheme so that the global dynamics of solutions of the corresponding continuous models can be efficiently preserved is still an open problem [25]. Mickens has made an attempt in this connection, by presenting a robust non-standard finite difference (NSFD)scheme [26], which has been widely employed in the study of different epidemic models [23,25,26,27,28,29,30,31,32]. For example, Yang et al. [30] applied the NSFD scheme to discretize system (1) and found that the dynamical behaviors of the discrete model are consistent with the original system. Motivated by the work of [23,25,26,27,28,29,30,31,32], we apply the NSFD scheme to discretize system (4) and obtain:
(7)
Here, we assume that , let be the time step size and be the space step size with N a positive integer. Suppose that there exist two integers with . Denote the mesh grid point as with and . At each point, we use approximations of by . We set all the approximation solutions at the time by the -dimensional vector , where and the notation is the transposition of a vector. means that all components of a vector are nonnegative. The discrete initial conditions of system (7) are given as
(8)
for all , and the discrete boundary conditions areThe main purpose of this paper is to investigate the asymptotic stability of system (4) and (7). Another purpose of this paper is to discuss, whether the discretized system (7) that derived by using NSFD scheme can efficiently preserves the global asymptotic stability of the equilibria to the original system (4) or not.
The paper is organized as follows. In Section 2.1, the model is introduced, and, under some assumptions, positivity and boundedness properties of the solutions are proved by using nonlinear functional analysis methods. In Section 2.2, we consider the existence of infection-free equilibrium, -inactivated equilibrium and infection equilibrium with immunity. In Section 2.3, by introducing the reproductive numbers for viral infection and for immune response number , we show that and act as threshold parameter for the existence and stability of equilibria. If , the infection-free equilibrium is globally asymptotically stable, and the viruses are cleared; if , the -inactivated equilibrium is globally asymptotically stable, and the infection becomes chronic but without persistent response; if , the -activated equilibrium is globally asymptotically stable, and the infection is chronic with persistent response. In Section 3, we investigate the global dynamics of discrete system (7) correponding to the continuous system (4), by using nonstandard finite difference scheme. We find that the global stability of the equilibria of the continuous model and the discrete model is not always consistent. That is, if , or , the global stability of the two kinds model is consistent. However, if , the global stability of the two kinds model is not consistent. In Section 4, some numerical simulations are given to illustrate the theoretical results and show the effects of diffusion factors on the time-delay virus model. The paper ends with a discussion in Section 5.
2. Dynamical Behaviors of Continuous System
2.1. Positivity and Boundedness of Solutions
In order to study positivity and boundedness of solutions to system (4), we first introduce some notations.
Assume be the space of continuous functions from the topological space into the space . Let be the Banach space of continuous functions from into X with the usual supremum normal. is defined by
Define , where is a continuous function from to C.For any ,
system (4)–(6) has a unique solution defined on ; and
the solution of (4)–(6) is nonnegative and bounded for all .
For any and , assume
byThen system (4)–(6) can be rewritten as following form
(9)
where , and . It is clear that the operator F is locally Lipschitz in space X. From [27,32,33,34,35,36], we conclude that system (9) has a unique local solution on , where is the maximal existence time for solution of system (4). In addition, it follows from 0 is a sub-solution of each equation of system (4) that .Next, we prove the boundedness of solutions. Let
then where , then so , and are bounded.From the boundedness of and system (4)–(6), satisfies the following system
(10)
Assume be a solution to the ordinary differential equation
(11)
thenIt follows from the comparison principle [37] that . Therefore
From the above, and are bounded in . Furthermore, it follows from the standard theory for semilinear parabolic systems [38] that . □
2.2. Existence of Equilibria
It is clear that system (4) always has an infection-free equilibrium
where , corresponding to the maximal level of healthy cells. It is the only biologically meaningful equilibrium if where is basic reproduction number.At an equilibrium of model (4), we have
(12)
if , then a short calculation which implies that in order to have and at an equilibrium, then . From the second equation of (12), we have then substituting T into the first equation of (12)According to , for all , we have
further, from and this implies that there exists a CTL-inactivated equilibrium whenDefine
which stands for the immune response activation number and determines whether a persistent immune response can be established or not. If , then from (12), we have then, the infection equilibrium with immunity exists if From the above, we have the following result.For system (4),
- (1)
if , then there exists a unique infection-free equilibrium .
- (2)
if , then there exists a unique infection equilibrium without immunity besides .
- (3)
if , then there exists a unique infection equilibrium with immunity besides and .
2.3. Global Asymptotic Stability
In this section, we will investigate the global asymptotic stability of the system (4). Assume for , then .
For system (4), if , the infection-free equilibrium is globally asymptotically stable.
Define the Lyapunov function as follows
then , calculating along the solutions of system (4) and using , we have from and condition , we obtain thereforeIt is follows from that . Furthermore, the largest invariant set of is the singleton . Then, the classical LaSalle’s invariance principle implies that is globally asymptotically stable. This completes the proof. □
For system (4), if , the -inactivated infection equilibrium is globally asymptotically stable.
Define the Lyapunov function as follows
The Lyapunov derivative along system (4) is
According to the equilibrium conditions of , that
also recall and , we haveIt follows from that
As for , similar to [23], , then , therefore is stable, and holds if and only if and when , or when . The largest invariance set of is the singleton . It follows from the classical LaSalle’s invariance principle that is globally asymptotically stable when . This completes the proof. □
For system (4), if , the interior equilibrium is globally asymptotically stable.
Define the Lyapunov function as follows
calculating along the solutions of system (4), we have using the equilibrium conditions of , then also recall and , we have from , it is easy to see thatAs for , then . The largest invariant set of is the single point , similar to the proof of Theorem 3, is globally asymptotically stable. This completes the proof. □
3. Dynamical Behaviors of Discrete System
In preceding section, by introducing Lyapunov functions, we have shown by using continuous Lyapunov functionals that the global asymptotic stability of the equilibria of the continuous system (4) is completely determined by the basic reproduction number. and act as threshold parameter for the existence and stability of equilibria. This arises a natural question that whether the global asymptotic stability of the equilibria of the discrete system (7) can be preserved. In this section, we will discuss this problem.
Obviously, the discrete system (7) has the same equilibria as system (4). Similarly, is the infection-free equilibrium, stands for the -inactivated equilibrium and is the -activated equilibrium.
Rewriting the discrete system (7) yields
(13)
where the square matrix A of dimension is given by with . It is clear that A is strictly diagonally dominant matrix, therefore A is non-singular. From the third equation of the above system, we haveFor any , the solutions of the system (7) remain nonnegative and bounded for all .
Since all parameters in (7) are positive, then using the induction, it is easy to deduce from (13) that all solutions of system (7) remain nonnegative provided that the initial value are nonnegative, for all .
Next, we establish the boundedness of solutions. Define a sequence as follows
then where , then we have it follows from the induction that therefore this implies that is bounded, then , and are bounded.From the third equation of system (7)
since is bounded, then there exists such that for all , then by induction, we have therefore is bounded. This completes the proof. □Global Stability
In this section, we will study the global stability of the equilibria of system (7).
For system (7), if , the infection-free equilibrium is globally asymptotically stable.
Define the discrete Lyapunov function as follows
It follows from for all , that for all . Then, along the trajectory of (7)
using the equilibrium condition of , we have the last inequality is deduced from condition , if , then , for all , therefore, is monotone decreasing sequence. It follows from that then thereforeIf , then implies that , , , .
If , then implies that , , from system (7), we obtain , .
Hence, is globally asymptotically stable when . This completes the proof. □
For system (7), if , the -inactivated infection equilibrium of is globally asymptotically stable.
Define the discrete Lyapunov function as follows
Since for all , then for all . The Lyapunov derivative along (7) is
As satisfies
thenSimilar to the proof of Theorem 3, we have
It follows from that , for all , this implies that is monotone decreasing sequence. As , then , , so that . Combined with system (7), we obtain , and , for all , then of system (7) is globally asymptotically stable. This completes the proof. □
For system (7), if , the interior equilibrium is not globally asymptotically stable.
Define the discrete Lyapunov function as follows
it follows from that for all . Then, along the trajectory of (7)From the equilibrium condition of , we have
thenSimilar to the proof of Theorem 3, we have
this implies that is a monotone decreasing sequence, then , , thereforeAccording to the system (7), we claim that the CTL-activated equilibrium is not globally asymptotically stable. In fact, if the CTL-activated equilibrium is globally asymptotically stable, from the above inequality, we have
this is a contradiction. This completes the proof. □4. Numerical Simulation
In this section, we choose , some numerical results of system (4) are presented for supporting our analytic results. Based on biological meanings of virus dynamics model from papers [39,40], we have estimated the values of our model parameters as follows:
If we choose , then we can give a numerical simulation of the stability of system (4). Using the data in Table 1, we first show in a simulation that the interior equilibrium is stable (see Figure 1).
From Figure 1, we can see that the population has gradually stabilized after a sharp fluctuation.
If we choose and , then . We can simulate that the infection-free equilibrium is globally asymptotically stable (see Figure 2).
From Figure 2, we can see that the number of infected cells, virus and CTLs tends to zero, except uninfected cells.
If we choose and , then . This moment the CTL-inactivated equilibrium is globally asymptotically stable (see Figure 3).
From Figure 3, we can see that the population in the compartment tends to 0. In addition, except for , the number of uninfected cells, infected cells, virus tends to certain constants.
The novelty of this paper is that we consider the effects of diffusion, time delay, and abstract functions on the spread of viruses. In order to see the impact of proliferation on the spread of the virus more intuitively, we first choose . Next, we select and decibels to simulate the image of I while other parameters keep the values in the Table 1.
The left image in Figure 4 is an image without time delay, and the right image is an image with time delay equal to 300. Since we are simulating long-term dynamic behavior, from the overall image of the two figures, there is no obvious difference in either the stable position or the growth rate. So where is the effect of diffusion reflected? We believe that the effect of diffusion should be reflected in the growth of I. Therefore, we project the two graphs in Figure 4 on the time-quantity axis (Figure 5).
From the left image of Figure 5, we can clearly see that when there is no time delay, the image rises smoothly and the curve is smooth. When the time lag is equal to 300, the image is not a smooth curve, which shows that the proliferation brings about the proliferation of infected cells and the uneven fluctuation.
5. Conclusions and Discussion
It is necessary to understand the dynamics model for HIV infection since these infected cells usually cause a response from the immune system. In this paper, we first developed a diffusive infection model (4) with general nonlinear incidence rate and two delays on the base of model (3), we show that the global stability of equilibria is completely determined by the reproductive numbers for viral infection and for immune response . Second, we considered the corresponding discretization of the continuous model by using nonstandard finite difference scheme, and then studied the global stability of the discrete system. Some numerical simulations were also presented to support our analytic results. In general, systems of PDE cannot be solved explicitly, and numerical solutions have to be studied instead. By using the NSFD scheme, we showed that the proposed discrete model partly preserves the global stability of equilibria of the corresponding continuous model. We plan to address how other diffusive terms (for infected and uninfected cells) affect the model in future work.
X.-L.L.: writing original draft preparation, methodology, formal analysis, editing, validation, funding acquisition; C.-C.Z.: validation, investigation, data curation, visualization. All authors have read and agreed to the published version of the manuscript.
This project is supported by the Natural Science Foundation of Jiangsu Province, China (Grant No. BK20190578)and the science and technology foundation of Suqian(S201818, Z2021131), China.
Not applicable.
Not applicable.
Not applicable.
The authors are very grateful to the reviewers for their invaluable and expert coments.
The authors declare no conflict of interest.
Publisher’s Note: MDPI stays neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Figure 1. When [Forumla omitted. See PDF.], the interior equilibrium [Forumla omitted. See PDF.] is globally asymptotically stable.
Figure 2. When [Forumla omitted. See PDF.], the infection-free equilibrium [Forumla omitted. See PDF.] is globally asymptotically stable.
Figure 3. When [Forumla omitted. See PDF.], the CTL-inactivated equilibrium [Forumla omitted. See PDF.] is globally asymptotically stable.
Figure 4. Comparison of compartment I at [Forumla omitted. See PDF.] and [Forumla omitted. See PDF.].
Figure 5. Comparison projection of compartment I when [Forumla omitted. See PDF.] and [Forumla omitted. See PDF.].
State variables and parameters of HIV-1 infection model.
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Abstract
In this paper, we propose and study a diffusive HIV infection model with infected cells delay, virus mature delay, abstract function incidence rate and a virus diffusion term. By introducing the reproductive numbers for viral infection
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Neither ProQuest nor its licensors make any representations or warranties with respect to the translations. The translations are automatically generated "AS IS" and "AS AVAILABLE" and are not retained in our systems. PROQUEST AND ITS LICENSORS SPECIFICALLY DISCLAIM ANY AND ALL EXPRESS OR IMPLIED WARRANTIES, INCLUDING WITHOUT LIMITATION, ANY WARRANTIES FOR AVAILABILITY, ACCURACY, TIMELINESS, COMPLETENESS, NON-INFRINGMENT, MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE. Your use of the translations is subject to all use restrictions contained in your Electronic Products License Agreement and by using the translation functionality you agree to forgo any and all claims against ProQuest or its licensors for your use of the translation functionality and any output derived there from. Hide full disclaimer
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1 School of Arts and Science, Suqian University, Suqian 223800, China;
2 School of Science, Jiangnan University, Wuxi 214122, China