Abstract

Advances in cryogenic transmission electron microscopy have revolutionised the determination of many macromolecular structures at atomic or near-atomic resolution. This method is based on conventional defocused phase contrast imaging. However, it has limitations of weaker contrast for small biological molecules embedded in vitreous ice, in comparison with cryo-ptychography, which shows increased contrast. Here we report a single-particle analysis based on the use of ptychographic reconstruction data, demonstrating that three dimensional reconstructions with a wide information transfer bandwidth can be recovered by Fourier domain synthesis. Our work suggests future applications in otherwise challenging single particle analyses, including small macromolecules and heterogeneous or flexible particles. In addition structure determination in situ within cells without the requirement for protein purification and expression may be possible.

Cryogenic electron ptychography (Cryo-EPty) is an emerging method for imaging the structure of biomacromolecules. Here, authors develop single particle analysis based on cryo-EPty phase for high contrast, wide spatial frequency-band 3D imaging.

Details

Title
Cryogenic electron ptychographic single particle analysis with wide bandwidth information transfer
Author
Pei, Xudong 1 ; Zhou, Liqi 2   VIAFID ORCID Logo  ; Huang, Chen 3   VIAFID ORCID Logo  ; Boyce, Mark 4   VIAFID ORCID Logo  ; Kim, Judy S. 5   VIAFID ORCID Logo  ; Liberti, Emanuela 3   VIAFID ORCID Logo  ; Hu, Yiming 1 ; Sasaki, Takeo 6   VIAFID ORCID Logo  ; Nellist, Peter D. 7   VIAFID ORCID Logo  ; Zhang, Peijun 8   VIAFID ORCID Logo  ; Stuart, David I. 8 ; Kirkland, Angus I. 9   VIAFID ORCID Logo  ; Wang, Peng 2   VIAFID ORCID Logo 

 Nanjing University, National Laboratory of Solid State Microstructures, Jiangsu Key Laboratory of Artificial Functional Materials, College of Engineering and Applied Sciences and Collaborative Innovation Center of Advanced Microstructures, Nanjing, China (GRID:grid.41156.37) (ISNI:0000 0001 2314 964X) 
 Nanjing University, National Laboratory of Solid State Microstructures, Jiangsu Key Laboratory of Artificial Functional Materials, College of Engineering and Applied Sciences and Collaborative Innovation Center of Advanced Microstructures, Nanjing, China (GRID:grid.41156.37) (ISNI:0000 0001 2314 964X); University of Warwick, Department of Physics, Coventry, UK (GRID:grid.7372.1) (ISNI:0000 0000 8809 1613) 
 Harwell Science and Innovation Campus, The Rosalind Franklin Institute, Didcot, UK (GRID:grid.507854.b) 
 University of Oxford, Division of Structural Biology, Welcome Trust Centre for Human Genetics, Oxford, UK (GRID:grid.4991.5) (ISNI:0000 0004 1936 8948) 
 Harwell Science and Innovation Campus, The Rosalind Franklin Institute, Didcot, UK (GRID:grid.507854.b); University of Oxford, Department of Materials, Oxford, UK (GRID:grid.4991.5) (ISNI:0000 0004 1936 8948) 
 JEOL Ltd, Tokyo, Japan (GRID:grid.410892.6) (ISNI:0000 0001 2284 8430) 
 University of Oxford, Department of Materials, Oxford, UK (GRID:grid.4991.5) (ISNI:0000 0004 1936 8948) 
 University of Oxford, Division of Structural Biology, Welcome Trust Centre for Human Genetics, Oxford, UK (GRID:grid.4991.5) (ISNI:0000 0004 1936 8948); Harwell Science and Innovation Campus, Diamond Light Source, Didcot, UK (GRID:grid.18785.33) (ISNI:0000 0004 1764 0696) 
 Harwell Science and Innovation Campus, The Rosalind Franklin Institute, Didcot, UK (GRID:grid.507854.b); University of Oxford, Department of Materials, Oxford, UK (GRID:grid.4991.5) (ISNI:0000 0004 1936 8948); Harwell Science and Innovation Campus, Diamond Light Source, Didcot, UK (GRID:grid.18785.33) (ISNI:0000 0004 1764 0696) 
Pages
3027
Publication year
2023
Publication date
2023
Publisher
Nature Publishing Group
e-ISSN
20411723
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
2819157896
Copyright
© The Author(s) 2023. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.