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Abstract

This paper presents some of our findings on the scalability of parallel 3D mesh generation on distributed memory machines. The primary objective of this study was to evaluate a distributed memory approach for implementing a 3D parallel Delaunay-based algorithm that converts images to meshes by leveraging an efficient shared memory implementation. The secondary objective was to evaluate the effectiveness of labor (i.e., reduce development time) while introducing minimal overheads to maintain the parallel efficiency of the end-product i.e., distributed implementation. The distributed algorithm utilizes two existing and independently developed parallel Delaunay-based methods: (1) a fine-grained method that employs multi-threading and speculative execution on shared memory nodes and (2) a loosely coupled Delaunay-refinement framework for multi-node platforms. The shared memory implementation uses a FIFO work-sharing scheme for thread scheduling, while the distributed memory implementation utilizes the MPI and the Master-Worker (MW) model. The findings from the specific MPI-MW implementation we tested suggest that the execution on (1) 40 cores not necessary in the same single node is 2.3 times faster than the execution on ten cores, (2) the best speedup is 5.4 with 180 cores again the comparison is with the best performance on ten cores. A closer look at the performance of distributed memory and shared memory implementation executing on a single node (40 cores) suggest that the overheads introduced in the MPI-MW implementation are high and render the MPI-MW implementation 4 times slower than the shared memory code using the same number of cores. These findings raise several questions on the potential scalability of a "black box" approach, i.e., re-using a code designed to execute efficiently on shared memory machines without considering its potential use in a distributed memory setting.

Details

1009240
Title
Experience with Distributed Memory Delaunay-based Image-to-Mesh Conversion Implementation
Publication title
arXiv.org; Ithaca
Publication year
2023
Publication date
Aug 24, 2023
Section
Computer Science
Publisher
Cornell University Library, arXiv.org
Source
arXiv.org
Place of publication
Ithaca
Country of publication
United States
University/institution
Cornell University Library arXiv.org
e-ISSN
2331-8422
Source type
Working Paper
Language of publication
English
Document type
Working Paper
Publication history
 
 
Online publication date
2023-08-25
Milestone dates
2023-08-24 (Submission v1)
Publication history
 
 
   First posting date
25 Aug 2023
ProQuest document ID
2857165998
Document URL
https://www.proquest.com/working-papers/experience-with-distributed-memory-delaunay-based/docview/2857165998/se-2?accountid=208611
Full text outside of ProQuest
Copyright
© 2023. This work is published under http://creativecommons.org/licenses/by-nc-sa/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Last updated
2023-08-26
Database
ProQuest One Academic