Content area

Abstract

Synaptic plasticity underlies the brain's ability to learn and adapt. While experiments in brain slices have revealed mechanisms and protocols for the induction of plasticity between pairs of neurons, how these synaptic changes are coordinated in biological neuronal networks to ensure the emergence of learning remains poorly understood. Simulation and modeling have emerged as important tools to study learning in plastic networks, but have yet to achieve a scale that incorporates realistic network structure, active dendrites, and multi-synapse interactions, key determinants of synaptic plasticity. To rise to this challenge, we endowed an existing large-scale cortical network model, incorporating data-constrained dendritic processing and multi-synaptic connections, with a calcium-based model of functional plasticity that captures the diversity of excitatory connections extrapolated to in vivo-like conditions. This allowed us to study how dendrites and network structure interact with plasticity to shape stimulus representations at the microcircuit level. In our exploratory simulations, plasticity acted sparsely and specifically, firing rates and weight distributions remained stable without additional homeostatic mechanisms. At the circuit level, we found plasticity was driven by co-firing stimulus-evoked functional assemblies, spatial clustering of synapses on dendrites, and the topology of the network connectivity. As a result of the plastic changes, the network became more reliable with more stimulus-specific responses. We confirmed our testable predictions in the MICrONS datasets, an openly available electron microscopic reconstruction of a large volume of cortical tissue. Our results quantify at a large scale how the dendritic architecture and higher-order structure of cortical microcircuits play a central role in functional plasticity and provide a foundation for elucidating their role in learning.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

* First round of revisions at eLife.

* https://zenodo.org/record/8158471

Details

1009240
Title
Assemblies, synapse clustering and network topology interact with plasticity to explain structure-function relationships of the cortical connectome
Publication title
bioRxiv; Cold Spring Harbor
Publication year
2025
Publication date
Feb 21, 2025
Section
New Results
Publisher
Cold Spring Harbor Laboratory Press
Source
BioRxiv
Place of publication
Cold Spring Harbor
Country of publication
United States
University/institution
Cold Spring Harbor Laboratory Press
Publication subject
ISSN
2692-8205
Source type
Working Paper
Language of publication
English
Document type
Working Paper
Publication history
 
 
Milestone dates
2023-08-07 (Version 1); 2023-08-08 (Version 2); 2024-01-11 (Version 3); 2024-07-26 (Version 4); 2024-07-29 (Version 5)
ProQuest document ID
2913260825
Document URL
https://www.proquest.com/working-papers/assemblies-synapse-clustering-network-topology/docview/2913260825/se-2?accountid=208611
Copyright
© 2025. This article is published under http://creativecommons.org/licenses/by/4.0/ (“the License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Last updated
2025-02-22
Database
ProQuest One Academic