Abstract

Biomedical research and clinical practice are in the midst of a transition toward significantly increased use of artificial intelligence (AI) and machine learning (ML) methods. These advances promise to enable qualitatively deeper insight into complex challenges formerly beyond the reach of analytic methods and human intuition while placing increased demands on ethical and explainable artificial intelligence (XAI), given the opaque nature of many deep learning methods. The U.S. National Institutes of Health (NIH) has initiated a significant research and development program, Bridge2AI, aimed at producing new "flagship" datasets designed to support AI/ML analysis of complex biomedical challenges, elucidate best practices, develop tools and standards in AI/ML data science, and disseminate these datasets, tools, and methods broadly to the biomedical community. An essential set of concepts to be developed and disseminated in this program along with the data and tools produced are criteria for AI-readiness of data, including critical considerations for XAI and ethical, legal, and social implications (ELSI) of AI technologies. NIH Bridge to Artificial Intelligence (Bridge2AI) Standards Working Group members prepared this article to present methods for assessing the AI-readiness of biomedical data and the data standards perspectives and criteria we have developed throughout this program. While the field is rapidly evolving, these criteria are foundational for scientific rigor and the ethical design and application of biomedical AI methods.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

* Updated Supplemental Data to include new AI-readiness evaluations reflecting readiness improvements from the Cell Maps for AI (CM4AI) Functional Genomics and Precision Public Health (Voice) Bridge2AI Grand Challenges.

Details

Title
AI-readiness for Biomedical Data: Bridge2AI Recommendations
Author
Clark, Timothy; Caufield, Harry; Parker, Jillian A; Sadnan Al Manir; Amorim, Edilberto; Eddy, James; Gim, Nayoon; Gow, Brian; Goar, Wesley; Haendel, Melissa; Hansen, Jan N; Harris, Nomi; Hermjakob, Henning; Mcweeney, Shannon K; Nebeker, Camille; Nikolov, Milen; Shaffer, Jamie; Sheffield, Nathan; Sheynkman, Gloria; Stevenson, James; Mungall, Chris; Chen, Jake Y; Wagner, Alex; Kong, Sek Won; Ghosh, Satrajit S; Patel, Bhavesh; Williams, Andrew; Munoz-Torres, Monica C
University/institution
Cold Spring Harbor Laboratory Press
Section
New Results
Publication year
2024
Publication date
Nov 24, 2024
Publisher
Cold Spring Harbor Laboratory Press
ISSN
2692-8205
Source type
Working Paper
Language of publication
English
ProQuest document ID
3125865248
Copyright
© 2024. This article is published under http://creativecommons.org/licenses/by-nd/4.0/ (“the License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.