Content area

Abstract

This study reports the draft genome of Candidatus Phytoplasma pyri strain P1, isolated from Argentina, marking the first global sequencing of this species. The genome assembly consisted of 16 contigs, with a total length of 575,431 bp, a GC content of 20.35%, and 125X coverage. A total of 536 genes were annotated, including those related to metabolism, genetic information processing, and signaling. Phylogenetic analysis placed Candidatus Phytoplasma pyri within the 16SrX group, supporting its classification as a distinct species from Candidatus Phytoplasma mali and Candidatus Phytoplasma prunorum, despite their close evolutionary proximity. The investigation also identified 17 secreted proteins, including homologs of known effectors such as SAP39 and SAP41, as well as conserved proteins associated with virulence mechanisms. A homologue of the Imp immunodominant membrane protein was also characterized, revealing conserved gene organization across related strains. These findings contribute to the understanding of Candidatus Phytoplasma pyri pathogenic and provide valuable genomic data for future research. This study highlights the importance of expanding phytoplasma genomics, as it provides a crucial first step in understanding Candidatus Phytoplasma pyri and its role in plant pathology

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

* https://www.ncbi.nlm.nih.gov/search/all/?term=PRJNA1212062

Details

1009240
Title
First genomic resource of Candidatus Phytoplasma pyri associated to pear decline
Publication title
bioRxiv; Cold Spring Harbor
Publication year
2025
Publication date
Jan 24, 2025
Section
New Results
Publisher
Cold Spring Harbor Laboratory Press
Source
BioRxiv
Place of publication
Cold Spring Harbor
Country of publication
United States
University/institution
Cold Spring Harbor Laboratory Press
Publication subject
ISSN
2692-8205
Source type
Working Paper
Language of publication
English
Document type
Working Paper
ProQuest document ID
3159549583
Document URL
https://www.proquest.com/working-papers/first-genomic-resource-candidatus-phytoplasma/docview/3159549583/se-2?accountid=208611
Copyright
© 2025. This article is published under http://creativecommons.org/licenses/by-nc-nd/4.0/ (“the License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Last updated
2025-01-25
Database
ProQuest One Academic