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Abstract

Synapses are the connections that transform neurons from simple electrically charged cells into complex circuits that support perception, cognition and action. Recent advances in single-punctum synapse mapping in mice have made it possible to study the diversity of synapses and how these synapse types are differentially expressed across the brain. A salient question is how synapse diversity shapes the spatial patterning of whole-brain dynamics. Here we derive >6,000 time-series features from fMRI recordings in awake mice to construct a comprehensive macroscale dynamical phenotype of each synapse type. We find that spatial variation in synapse types colocalizes with spatial variation in regional dynamics. Time-series in regions enriched for SAP102-expressing synapses display high-amplitude events while time-series in regions enriched for PSD95-expressing synapses display low stationarity. These regional variations in synapse types and dynamics are associated with patterns of structural and functional connectivity and the placement of hubs. Finally, using two additional fMRI datasets in anaesthetized mice, we show that synapses expressing short- and long-lifetime proteins are differentially engaged across behavioural states. Collectively, this work demonstrates that the spatial organization of microscale synapse types fundamentally shapes whole-brain dynamics.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

* https://github.com/netneurolab/hansen_synaptome

Details

1009240
Title
Synaptome architecture shapes regional dynamics in the mouse brain
Publication title
bioRxiv; Cold Spring Harbor
Publication year
2025
Publication date
Jan 25, 2025
Section
New Results
Publisher
Cold Spring Harbor Laboratory Press
Source
BioRxiv
Place of publication
Cold Spring Harbor
Country of publication
United States
University/institution
Cold Spring Harbor Laboratory Press
Publication subject
ISSN
2692-8205
Source type
Working Paper
Language of publication
English
Document type
Working Paper
ProQuest document ID
3159711641
Document URL
https://www.proquest.com/working-papers/synaptome-architecture-shapes-regional-dynamics/docview/3159711641/se-2?accountid=208611
Copyright
© 2025. This article is published under http://creativecommons.org/licenses/by/4.0/ (“the License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Last updated
2025-01-26
Database
ProQuest One Academic