Content area

Abstract

Climate change thaws permafrost, which releases greenhouse gases partly from dormant microorganisms awakening and metabolizing organic matter. Though DNA viruses that infect these soil microbes have been studied, little is known on soil RNA viruses, which typically infect microeukaryotes. Here we identify and characterize 2,651 RNA viruses from a 4-year time series of bulk soil metatranscriptomes derived from the climatically fragile Stordalen Mire ecosystem - a long-studied permafrost peatland. RNA virus diversity was structured by habitat (palsa, bog, and fen), and these patterns correlated with pH and carbon dioxide and methane emissions. Further, host prediction, virus-encoded metabolite-transforming and information-processing functions suggested roles in ecosystem-scale carbon fluxes and contribute to greenhouse gases emissions. Together, these RNA virus ecogenomic data in permafrost provide essential baseline information for integration into predictive models to support hypothesis testing.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

* Author Jens Kuhn (NIH/NIAID) was removed from the author list, as well as his associated acknowledgments. This change was requested by the federal government agencies at which the author works at.

Details

1009240
Title
RNA virus ecogenomics along a subarctic permafrost thaw gradient
Publication title
bioRxiv; Cold Spring Harbor
Publication year
2025
Publication date
Feb 17, 2025
Section
New Results
Publisher
Cold Spring Harbor Laboratory Press
Source
BioRxiv
Place of publication
Cold Spring Harbor
Country of publication
United States
University/institution
Cold Spring Harbor Laboratory Press
Publication subject
ISSN
2692-8205
Source type
Working Paper
Language of publication
English
Document type
Working Paper
Publication history
 
 
Milestone dates
2025-02-13 (Version 1)
ProQuest document ID
3166351675
Document URL
https://www.proquest.com/working-papers/rna-virus-ecogenomics-along-subarctic-permafrost/docview/3166351675/se-2?accountid=208611
Copyright
© 2025. This article is published under http://creativecommons.org/licenses/by-nc-nd/4.0/ (“the License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.
Last updated
2025-02-18
Database
ProQuest One Academic