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© The Author(s) 2025. This work is published under http://creativecommons.org/licenses/by/4.0/ (the "License"). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.

Abstract

This study presents an interpretable AI-assisted diagnostic approach for papillary thyroid carcinoma (PTC) cytopathology by combining graph neural networks (GNNs) with knowledge graphs (KGs). Routine cytology smears from 281 PTC cases were scanned, labeled, and processed using the Cascade RCNN model to detect pathological cell features, including 45,680 ground-glass nuclei, 712 nuclear grooves, and 116 intranuclear inclusions. By integrating GNNs, the model achieved a mean intersection over union (mIoU) of 56.14% and a mean average precision (mAP) of 0.87. The GINet model further improved classification accuracy to 88.84%. Our approach also incorporates a clinical decision support system (CDSS) for querying KGs, providing explainable diagnostic outputs. This method offers an interpretable and reliable AI tool for PTC diagnosis, enhancing the transparency of AI-assisted pathology systems.

Details

Title
Interpretable AI-assisted diagnosis of papillary thyroid cancer cytopathology using graph neural networks and knowledge graphs
Author
Wu, Li-xue 1 ; Jiang, Yong 2 ; Luo, Tian-you 2 ; Hou, Jia-xin 3 ; Deng, Yang 4 ; Han, Lu-xin 5 ; Jiang, Ting-feng 5 ; Bao, Ji 4 

 Department of Pathology, West China Hospital, Sichuan University, 610041, Chengdu, Sichuan, China (ROR: https://ror.org/011ashp19) (GRID: grid.13291.38) (ISNI: 0000 0001 0807 1581); Department of Pathology, West China School of Public Health and West China Fourth Hospital, Sichuan University, 610041, Chengdu, Sichuan, China (ROR: https://ror.org/011ashp19) (GRID: grid.13291.38) (ISNI: 0000 0001 0807 1581) 
 Department of Pathology, West China Hospital, Sichuan University, 610041, Chengdu, Sichuan, China (ROR: https://ror.org/011ashp19) (GRID: grid.13291.38) (ISNI: 0000 0001 0807 1581) 
 West China Clinical Medical College of Sichuan University, 610041, Chengdu, Sichuan, China (ROR: https://ror.org/011ashp19) (GRID: grid.13291.38) (ISNI: 0000 0001 0807 1581) 
 Department of Pathology, Key Laboratory of Transplant Engineering and Immunology, West China Hospital, Institute of Clinical Pathology, Sichuan University, 610041, Chengdu, Sichuan, China (ROR: https://ror.org/011ashp19) (GRID: grid.13291.38) (ISNI: 0000 0001 0807 1581) 
 Sichuan KgCure Co., Ltd., Sichuan University, 610041, Chengdu, Sichuan, China (ROR: https://ror.org/011ashp19) (GRID: grid.13291.38) (ISNI: 0000 0001 0807 1581) 
Pages
32165
Section
Article
Publication year
2025
Publication date
2025
Publisher
Nature Publishing Group
e-ISSN
20452322
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
3245520105
Copyright
© The Author(s) 2025. This work is published under http://creativecommons.org/licenses/by/4.0/ (the "License"). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.