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Abstract
The diamondback moth, Plutella xylostella is a cosmopolitan pest that has evolved resistance to all classes of insecticide, and costs the world economy an estimated US $4-5 billion annually. We analyse patterns of variation among 532 P. xylostella genomes, representing a worldwide sample of 114 populations. We find evidence that suggests South America is the geographical area of origin of this species, challenging earlier hypotheses of an Old-World origin. Our analysis indicates that Plutella xylostella has experienced three major expansions across the world, mainly facilitated by European colonization and global trade. We identify genomic signatures of selection in genes related to metabolic and signaling pathways that could be evidence of environmental adaptation. This evolutionary history of P. xylostella provides insights into transoceanic movements that have enabled it to become a worldwide pest.
The diamondback moth, Plutella xylostella is a cosmopolitan agricultural pest. By analyzing 532 genomes from 114 populations around the world, the authors find evidence supporting a South American origin of this moth, and look for signatures of positive selection.
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1 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Joint International Research Laboratory of Ecological Pest Control, Ministry of Education, Fuzhou, China (GRID:grid.419897.a) (ISNI:0000 0004 0369 313X)
2 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Joint International Research Laboratory of Ecological Pest Control, Ministry of Education, Fuzhou, China (GRID:grid.419897.a) (ISNI:0000 0004 0369 313X); Department of Botany, University of British Columbia, Vancouver, Canada (GRID:grid.17091.3e) (ISNI:0000 0001 2288 9830)
3 BGI Genomics, BGI-Shenzhen, Shenzhen, China (GRID:grid.21155.32) (ISNI:0000 0001 2034 1839)
4 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Joint International Research Laboratory of Ecological Pest Control, Ministry of Education, Fuzhou, China (GRID:grid.419897.a) (ISNI:0000 0004 0369 313X); School of BioSciences, The University of Melbourne, Melbourne, Australia (GRID:grid.1008.9) (ISNI:0000 0001 2179 088X)
5 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, Collaborative Innovation Center of Chemical Science and Engineering, School of Pharmaceutical Science and Technology, Tianjin University, Tianjin, China (GRID:grid.33763.32) (ISNI:0000 0004 1761 2484)
6 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Joint International Research Laboratory of Ecological Pest Control, Ministry of Education, Fuzhou, China (GRID:grid.419897.a) (ISNI:0000 0004 0369 313X); Department of Biological Sciences, Brock University, 1812 Sir Isaac Brock Way, St. Catharines, Canada (GRID:grid.411793.9) (ISNI:0000 0004 1936 9318)
7 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Joint International Research Laboratory of Ecological Pest Control, Ministry of Education, Fuzhou, China (GRID:grid.419897.a) (ISNI:0000 0004 0369 313X); Graham Centre, Charles Sturt University, Orange, Australia (GRID:grid.1037.5) (ISNI:0000 0004 0368 0777)
8 School of Biological Sciences, University of Adelaide, Adelaide, Australia (GRID:grid.1010.0) (ISNI:0000 0004 1936 7304)
9 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Joint International Research Laboratory of Ecological Pest Control, Ministry of Education, Fuzhou, China (GRID:grid.419897.a) (ISNI:0000 0004 0369 313X); Instituto Superior de Formación Docente Salomé Ureña (ISFODOSU), Recinto Lus Napoleón Núñez Molina, Carretera Duarte, Km 10 1/2, Municipio de Licey Al Medio, Provincia de Santiago, República Dominicana (GRID:grid.441480.d) (ISNI:0000 0004 5936 9208)
10 Faculty of Land and Food Systems, University of British Columbia, Vancouver, Canada (GRID:grid.17091.3e) (ISNI:0000 0001 2288 9830)
11 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Joint International Research Laboratory of Ecological Pest Control, Ministry of Education, Fuzhou, China (GRID:grid.419897.a) (ISNI:0000 0004 0369 313X); Agriculture and Agri-Food Canada, Lethbridge Research Centre, Lethbridge, Canada (GRID:grid.55614.33) (ISNI:0000 0001 1302 4958)
12 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Joint International Research Laboratory of Ecological Pest Control, Ministry of Education, Fuzhou, China (GRID:grid.419897.a) (ISNI:0000 0004 0369 313X); Division of Plant Sciences, University of Missouri, Columbia, USA (GRID:grid.134936.a) (ISNI:0000 0001 2162 3504)
13 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Joint International Research Laboratory of Ecological Pest Control, Ministry of Education, Fuzhou, China (GRID:grid.419897.a) (ISNI:0000 0004 0369 313X); Plant Health & Environment Laboratory, Ministry for Primary Industries, Auckland, New Zealand (GRID:grid.467701.3) (ISNI:0000 0001 0681 2788)
14 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Joint International Research Laboratory of Ecological Pest Control, Ministry of Education, Fuzhou, China (GRID:grid.419897.a) (ISNI:0000 0004 0369 313X); Department of Plant, Food, and Environmental Sciences, Faculty of Agriculture, Dalhousie University, PO Box 550, Truro, Canada (GRID:grid.55602.34) (ISNI:0000 0004 1936 8200)
15 Natural History Museum, Cromwell Road, South Kensington, London, UK (GRID:grid.35937.3b) (ISNI:0000 0001 2270 9879)
16 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); School of BioSciences, The University of Melbourne, Melbourne, Australia (GRID:grid.1008.9) (ISNI:0000 0001 2179 088X)
17 State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University, Fuzhou, China (GRID:grid.256111.0) (ISNI:0000 0004 1760 2876); Institute of Plant Protection, Fujian Academy of Agricultural Sciences, Fuzhou, China (GRID:grid.418033.d) (ISNI:0000 0001 2229 4212)
18 BGI Genomics, BGI-Shenzhen, Shenzhen, China (GRID:grid.21155.32) (ISNI:0000 0001 2034 1839); Institute of Plant Protection, Fujian Academy of Agricultural Sciences, Fuzhou, China (GRID:grid.418033.d) (ISNI:0000 0001 2229 4212); James D. Watson Institute of Genome Sciences, Hangzhou, China (GRID:grid.418033.d)
19 BGI Genomics, BGI-Shenzhen, Shenzhen, China (GRID:grid.21155.32) (ISNI:0000 0001 2034 1839); BGI-Shenzhen, Shenzhen, China (GRID:grid.21155.32) (ISNI:0000 0001 2034 1839); James D. Watson Institute of Genome Sciences, Hangzhou, China (GRID:grid.21155.32)