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Abstract
Host pathways mediating changes in immune states elicited by intestinal microbial colonization are incompletely characterized. Here we describe alterations of the host immune state induced by colonization of germ-free zebrafish larvae with an intestinal microbial community or single bacterial species. We show that microbiota-induced changes in intestinal leukocyte subsets and whole-body host gene expression are dependent on the innate immune adaptor gene myd88. Similar patterns of gene expression are elicited by colonization with conventional microbiome, as well as mono-colonization with two different zebrafish commensal bacterial strains. By studying loss-of-function myd88 mutants, we find that colonization suppresses Myd88 at the mRNA level. Tlr2 is essential for microbiota-induced effects on myd88 transcription and intestinal immune cell composition.
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1 Institute of Biology, Leiden University, Leiden, The Netherlands; Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, Denmark
2 Institute of Biology, Leiden University, Leiden, The Netherlands; Center for Synthetic Biology Engineering Research, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China
3 Institute of Biology, Leiden University, Leiden, The Netherlands
4 Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, Denmark