Abstract

Background & objectives: Human parvovirus B19V (B19V) is known to be associated with erythema infectiosum commonly in children, aplastic crisis, especially in persons with underlying haemolytic disorders, hydrops fetalis in pregnancies and arthritis. This cross-sectional study was aimed to determine the presence of B19V infection in childhood febrile illnesses, association of B19V with arthropathies and in adult patients with end-stage renal disease (ESRD) on dialysis. The genetic diversity among the sequences was also analysed. Methods: A nested polymerase chain reaction (nPCR) assay was used for B19V DNA targeting VP1/VP2 region and used for testing 618 patients and 100 healthy controls. Phylogenetic analysis on nucleotide and amino acid sequences was carried out to compare our sequences with other Indian strains and global strains. Results: Among 618 samples tested, seven (1.13%) were found positive. The phylogenetic analysis revealed that all the seven sequences belonged to genotype 1 and showed low genetic diversity. The clustering pattern of seven sequences was similar both by nucleotide and by predicted amino acid sequences. The fixed effects likelihood analysis showed no positive or negatively selected sites. Interpretation & conclusions: Seven samples (4 from non-traumatic arthropathies, 2 from patients with ESRD and 1 from febrile illness patient) were found positive by nPCR. When our seven sequences were compared with global strains, the closest neighbour was other Indian strains followed by the Tunisian strains.

Details

Title
Detection of parvovirus B19 in selected high-risk patient groups & their phylogenetic & selection analysis
Author
Kumaran Vadivel 1 ; Ramamurthy Mageshbabu 1 ; Sankar, Sathish 1 ; Jain, Amita 2 ; Vivekanandan Perumal 3 ; Srikanth, Padma 4 ; Ghosh Ranjan 5 ; Nair, Aravindan 1 ; Simoes, Eric 6 ; Nandagopal, Balaji 1 ; Sridharan, Gopalan 1 

 Sri Sakthi Amma Institute of Biomedical Research, Sri Narayani Hospital & Research Centre, Vellore 
 Department of Microbiology, King George Medical University, Lucknow 
 Kusuma School of Biological Sciences, Indian Institute of Technology, New Delhi 
 Department of Microbiology, Sri Ramachandra Medical College & Research Institute, Sri Ramachandra University, Chennai 
 School of Biosciences & Technology, VIT University, Vellore 
 School of Medicine & Professor of Pediatrics, University of Colorado, Aurora Colorado 
Pages
391-399
Publication year
2018
Publication date
Apr 2018
Publisher
Scientific Scholar
ISSN
0971-5916
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
2258211149
Copyright
© 2018. This work is published under https://creativecommons.org/licenses/by-nc-sa/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.