Abstract

N6-threonyl-carbamoylation of adenosine 37 of ANN-type tRNAs (t6A) is a universal modification essential for translational accuracy and efficiency. The t6A pathway uses two sequentially acting enzymes, YRDC and OSGEP, the latter being a subunit of the multiprotein KEOPS complex. We recently identified mutations in genes encoding four out of the five KEOPS subunits in children with Galloway-Mowat syndrome (GAMOS), a clinically heterogeneous autosomal recessive disease characterized by early-onset steroid-resistant nephrotic syndrome and microcephaly. Here we show that mutations in YRDC cause an extremely severe form of GAMOS whereas mutations in GON7, encoding the fifth KEOPS subunit, lead to a milder form of the disease. The crystal structure of the GON7/LAGE3/OSGEP subcomplex shows that the intrinsically disordered GON7 protein becomes partially structured upon binding to LAGE3. The structure and cellular characterization of GON7 suggest its involvement in the cellular stability and quaternary arrangement of the KEOPS complex.

Details

Title
Defects in t6A tRNA modification due to GON7 and YRDC mutations lead to Galloway-Mowat syndrome
Author
Arrondel, Christelle 1 ; Missoury, Sophia 2 ; Snoek, Rozemarijn 3   VIAFID ORCID Logo  ; Patat, Julie 1   VIAFID ORCID Logo  ; Menara, Giulia 1 ; Collinet, Bruno 4   VIAFID ORCID Logo  ; Liger, Dominique 2 ; Durand, Dominique 2   VIAFID ORCID Logo  ; Gribouval, Olivier 1   VIAFID ORCID Logo  ; Boyer, Olivia 5   VIAFID ORCID Logo  ; Buscara, Laurine 1 ; Martin, Gaëlle 1 ; Machuca, Eduardo 1 ; Nevo, Fabien 1 ; Lescop, Ewen 6 ; Braun, Daniela A 7 ; Anne-Claire Boschat 8   VIAFID ORCID Logo  ; Sanquer, Sylvia 9 ; Guerrera, Ida Chiara 10 ; Revy, Patrick 11 ; Parisot, Mélanie 12   VIAFID ORCID Logo  ; Masson, Cécile 13 ; Boddaert, Nathalie 14 ; Charbit, Marina 15 ; Decramer, Stéphane 16 ; Novo, Robert 17 ; Marie-Alice Macher 18 ; Ranchin, Bruno 19 ; Bacchetta, Justine 19 ; Laurent, Audrey 19 ; Collardeau-Frachon, Sophie 20   VIAFID ORCID Logo  ; van Eerde, Albertien M 3 ; Hildebrandt, Friedhelm 7   VIAFID ORCID Logo  ; Magen, Daniella 21 ; Antignac, Corinne 22   VIAFID ORCID Logo  ; Herman van Tilbeurgh 2 ; Mollet, Géraldine 1   VIAFID ORCID Logo 

 Laboratory of Hereditary Kidney Diseases, INSERM UMR1163, Université de Paris, Imagine Institute, Paris, France 
 Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France 
 Department of Genetics, University Medical Center Utrecht, Utrecht, The Netherlands; Center for Molecular Medicine, Utrecht University, Utrecht, The Netherlands 
 Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France; Institut de Minéralogie, de Physique des Matériaux et de Cosmochimie, UMR7590 CNRS/Sorbonne-Université, UPMC, Paris, France 
 Laboratory of Hereditary Kidney Diseases, INSERM UMR1163, Université de Paris, Imagine Institute, Paris, France; Department of Pediatric Nephrology, AP-HP, Necker Hospital, Paris, France 
 Institut de Chimie des Substances Naturelles, CNRS UPR2301, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France 
 Department of Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, USA 
 Mass Spectrometry Facility, INSERM UMR1163, Imagine Institute, Paris, France 
 Service de Biochimie métabolomique et protéomique, Hôpital Necker-Enfants Malades, Paris, France; INSERM UMR-S1124, Université de Paris, Paris, France 
10  Proteomics Platform 3P5-Necker, Université de Paris—Structure Fédérative de Recherche Necker, Inserm US24/CNRS, Paris, France 
11  Inserm UMR1163, Laboratory of Genome Dynamics in the Immune System, Labellisé Ligue contre le Cancer, Université de Paris, Imagine Institute, Paris, France 
12  Genomics Core Facility, Structure Fédérative de Recherche Necker, INSERM U1163 and Inserm US24/CNRS UMS3633, Université de Paris, Paris, France 
13  Bioinformatics Platform, INSERM UMR1163, Université de Paris, Imagine Institute, Paris, France 
14  Department of Pediatric Radiology, and Imagine Institute, INSERM UMR 1163 and INSERM U1000, Université de Paris, Hôpital Necker-Enfants Malades, Paris, France 
15  Department of Pediatric Nephrology, AP-HP, Necker Hospital, Paris, France 
16  Department of Pediatric Nephrology-Internal Medicine, Purpan Hospital, Toulouse, France 
17  Pediatric Nephrology Unit, University Hospital of Lille, Lille, France 
18  Department of Pediatric Nephrology, AP-HP, Robert Debre Hospital, Paris, France 
19  Service de Néphrologie, Rhumatologie et Dermatologie pédiatriques, Hospices Civils de Lyon, Hôpital Femme-Mère-Enfant, Centre de référence de maladies rénales rares, Université de Lyon, Bron, France 
20  Department of Pathology, Hospices Civils de Lyon-Hôpital Femme-Mère-Enfant, Claude Bernard Lyon 1 University, Bron, France 
21  Pediatric Nephrology Institute-Rambam Health Care Campus-Technion Faculty of Medicine, Haifa, Israel 
22  Laboratory of Hereditary Kidney Diseases, INSERM UMR1163, Université de Paris, Imagine Institute, Paris, France; Department of Genetics, AP-HP, Necker Hospital, Paris, France 
Pages
1-13
Publication year
2019
Publication date
Sep 2019
Publisher
Nature Publishing Group
e-ISSN
20411723
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
2283958126
Copyright
© 2019. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.