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Abstract
N6-threonyl-carbamoylation of adenosine 37 of ANN-type tRNAs (t6A) is a universal modification essential for translational accuracy and efficiency. The t6A pathway uses two sequentially acting enzymes, YRDC and OSGEP, the latter being a subunit of the multiprotein KEOPS complex. We recently identified mutations in genes encoding four out of the five KEOPS subunits in children with Galloway-Mowat syndrome (GAMOS), a clinically heterogeneous autosomal recessive disease characterized by early-onset steroid-resistant nephrotic syndrome and microcephaly. Here we show that mutations in YRDC cause an extremely severe form of GAMOS whereas mutations in GON7, encoding the fifth KEOPS subunit, lead to a milder form of the disease. The crystal structure of the GON7/LAGE3/OSGEP subcomplex shows that the intrinsically disordered GON7 protein becomes partially structured upon binding to LAGE3. The structure and cellular characterization of GON7 suggest its involvement in the cellular stability and quaternary arrangement of the KEOPS complex.
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1 Laboratory of Hereditary Kidney Diseases, INSERM UMR1163, Université de Paris, Imagine Institute, Paris, France
2 Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France
3 Department of Genetics, University Medical Center Utrecht, Utrecht, The Netherlands; Center for Molecular Medicine, Utrecht University, Utrecht, The Netherlands
4 Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France; Institut de Minéralogie, de Physique des Matériaux et de Cosmochimie, UMR7590 CNRS/Sorbonne-Université, UPMC, Paris, France
5 Laboratory of Hereditary Kidney Diseases, INSERM UMR1163, Université de Paris, Imagine Institute, Paris, France; Department of Pediatric Nephrology, AP-HP, Necker Hospital, Paris, France
6 Institut de Chimie des Substances Naturelles, CNRS UPR2301, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France
7 Department of Medicine, Boston Children’s Hospital, Harvard Medical School, Boston, MA, USA
8 Mass Spectrometry Facility, INSERM UMR1163, Imagine Institute, Paris, France
9 Service de Biochimie métabolomique et protéomique, Hôpital Necker-Enfants Malades, Paris, France; INSERM UMR-S1124, Université de Paris, Paris, France
10 Proteomics Platform 3P5-Necker, Université de Paris—Structure Fédérative de Recherche Necker, Inserm US24/CNRS, Paris, France
11 Inserm UMR1163, Laboratory of Genome Dynamics in the Immune System, Labellisé Ligue contre le Cancer, Université de Paris, Imagine Institute, Paris, France
12 Genomics Core Facility, Structure Fédérative de Recherche Necker, INSERM U1163 and Inserm US24/CNRS UMS3633, Université de Paris, Paris, France
13 Bioinformatics Platform, INSERM UMR1163, Université de Paris, Imagine Institute, Paris, France
14 Department of Pediatric Radiology, and Imagine Institute, INSERM UMR 1163 and INSERM U1000, Université de Paris, Hôpital Necker-Enfants Malades, Paris, France
15 Department of Pediatric Nephrology, AP-HP, Necker Hospital, Paris, France
16 Department of Pediatric Nephrology-Internal Medicine, Purpan Hospital, Toulouse, France
17 Pediatric Nephrology Unit, University Hospital of Lille, Lille, France
18 Department of Pediatric Nephrology, AP-HP, Robert Debre Hospital, Paris, France
19 Service de Néphrologie, Rhumatologie et Dermatologie pédiatriques, Hospices Civils de Lyon, Hôpital Femme-Mère-Enfant, Centre de référence de maladies rénales rares, Université de Lyon, Bron, France
20 Department of Pathology, Hospices Civils de Lyon-Hôpital Femme-Mère-Enfant, Claude Bernard Lyon 1 University, Bron, France
21 Pediatric Nephrology Institute-Rambam Health Care Campus-Technion Faculty of Medicine, Haifa, Israel
22 Laboratory of Hereditary Kidney Diseases, INSERM UMR1163, Université de Paris, Imagine Institute, Paris, France; Department of Genetics, AP-HP, Necker Hospital, Paris, France