Abstract

Developmental epileptic encephalopathies are devastating disorders characterized by intractable epileptic seizures and developmental delay. Here, we report an allelic series of germline recessive mutations in UGDH in 36 cases from 25 families presenting with epileptic encephalopathy with developmental delay and hypotonia. UGDH encodes an oxidoreductase that converts UDP-glucose to UDP-glucuronic acid, a key component of specific proteoglycans and glycolipids. Consistent with being loss-of-function alleles, we show using patients’ primary fibroblasts and biochemical assays, that these mutations either impair UGDH stability, oligomerization, or enzymatic activity. In vitro, patient-derived cerebral organoids are smaller with a reduced number of proliferating neuronal progenitors while mutant ugdh zebrafish do not phenocopy the human disease. Our study defines UGDH as a key player for the production of extracellular matrix components that are essential for human brain development. Based on the incidence of variants observed, UGDH mutations are likely to be a frequent cause of recessive epileptic encephalopathy.

UDP-glucuronic acid is a component of the extracellular matrix. Here, the authors report biallelic variants in the gene encoding UDP-Glucose 6-Dehydrogenase (UGDH) in individuals affected by developmental epileptic encephalopathies that impair UGDH stability, oligomerization, or enzymatic activity in vitro.

Details

Title
Loss-of-function mutations in UDP-Glucose 6-Dehydrogenase cause recessive developmental epileptic encephalopathy
Author
Hengel Holger 1   VIAFID ORCID Logo  ; Bosso-Lefèvre Célia 2 ; Grady, George 3 ; Szenker-Ravi Emmanuelle 4 ; Li, Hankun 5 ; Pierce, Sarah 6 ; Lebigot Élise 7   VIAFID ORCID Logo  ; Thong-Teck, Tan 8 ; Eio, Michelle Y 8 ; Narayanan Gunaseelan 8 ; Utami Kagistia Hana 9 ; Yau, Monica 10 ; Handal Nader 11 ; Deigendesch Werner 11 ; Keimer Reinhard 12 ; Marzouqa, Hiyam M 11 ; Gunay-Aygun Meral 13 ; Muriello, Michael J 13 ; Verhelst Helene 14 ; Weckhuysen, Sarah 15 ; Mahida Sonal 16 ; Naidu Sakkubai 16 ; Thomas, Terrence G 17 ; Lim, Jiin Ying 18 ; Tan, Ee Shien 18 ; Haye Damien 19 ; Willemsen Michèl A A P 20 ; Oegema Renske 21   VIAFID ORCID Logo  ; Mitchell, Wendy G 22 ; Pierson, Tyler Mark 23   VIAFID ORCID Logo  ; Andrews, Marisa V 24   VIAFID ORCID Logo  ; Willing, Marcia C 24 ; Rodan, Lance H 25 ; Barakat, Tahsin Stefan 26   VIAFID ORCID Logo  ; van Slegtenhorst Marjon 26 ; Gavrilova, Ralitza H 27 ; Martinelli, Diego 28 ; Gilboa Tal 29   VIAFID ORCID Logo  ; Tamim, Abdullah M 30 ; Hashem, Mais O 31 ; AlSayed, Moeenaldeen D 32 ; Abdulrahim, Maha M 32 ; Al-Owain, Mohammed 32 ; Awaji, Ali 33 ; Mahmoud Adel A H 34 ; Faqeih, Eissa A 35 ; Asmari Ali Al 35 ; Algain, Sulwan M 36 ; Jad, Lamyaa A 34 ; Aldhalaan, Hesham M 37 ; Helbig Ingo 38   VIAFID ORCID Logo  ; Koolen David A 39 ; Riess Angelika 40 ; Kraegeloh-Mann Ingeborg 41 ; Bauer, Peter 42 ; Gulsuner Suleyman 6   VIAFID ORCID Logo  ; Stamberger Hannah 15 ; Yu Jin, Ng Alvin 43 ; Tang, Sha 44 ; Sumanty, Tohari 43 ; Keren, Boris 45 ; Schultz-Rogers, Laura E 27   VIAFID ORCID Logo  ; Klee, Eric W 27 ; Barresi Sabina 28   VIAFID ORCID Logo  ; Tartaglia, Marco 28 ; Mor-Shaked Hagar 46 ; Maddirevula Sateesh 31 ; Begtrup Amber 47 ; Telegrafi Aida 47 ; Rolph, Pfundt 39 ; Schüle, Rebecca 1 ; Ciruna, Brian 10 ; Bonnard Carine 4 ; Pouladi, Mahmoud A 48 ; Stewart, James C 43 ; Claridge-Chang, Adam 49 ; Lefeber, Dirk J 50 ; Alkuraya Fowzan S 31   VIAFID ORCID Logo  ; Mathuru, Ajay S 51   VIAFID ORCID Logo  ; Byrappa, Venkatesh 52   VIAFID ORCID Logo  ; Barycki, Joseph J 3 ; Simpson, Melanie A 3 ; Jamuar Saumya S 53 ; Schöls Ludger 1 ; Reversade Bruno 54   VIAFID ORCID Logo 

 University of Tübingen, Department of Neurology and Hertie-Institute for Clinical Brain Research, Tübingen, Germany (GRID:grid.10392.39) (ISNI:0000 0001 2190 1447); German Center of Neurodegenerative Diseases (DZNE), Tübingen, Germany (GRID:grid.424247.3) (ISNI:0000 0004 0438 0426) 
 Institute of Medical Biology, A*STAR, Biopolis, Singapore, Singapore (GRID:grid.414735.0) (ISNI:0000 0004 0367 4692); Yong Loo Lin School of Medicine, Biopolis, National University of Singapore, Department of Paediatrics, Singapore, Singapore (GRID:grid.4280.e) (ISNI:0000 0001 2180 6431) 
 Department of Molecular and Structural Biochemistry North Carolina State University, Raleigh, USA (GRID:grid.40803.3f) (ISNI:0000 0001 2173 6074) 
 Institute of Medical Biology, A*STAR, Biopolis, Singapore, Singapore (GRID:grid.414735.0) (ISNI:0000 0004 0367 4692) 
 Yale-NUS College, 12 College Avenue West, Biopolis, Singapore, Singapore (GRID:grid.463064.3) (ISNI:0000 0004 4651 0380) 
 University of Washington, Division of Medical Genetics, Department of Medicine, Seattle, USA (GRID:grid.34477.33) (ISNI:0000000122986657) 
 Hopital Bicêtre, Assistance publique-Hôpitaux de Paris, 78 avenue du general leclerc, Service De Biochimie, Le Kremlin Bicêtre, France (GRID:grid.413784.d) (ISNI:0000 0001 2181 7253) 
 Singapore Stem Cell Bank, A∗STAR, Biopolis, Institute of Medical Biology, Singapore, Singapore (GRID:grid.185448.4) (ISNI:0000 0004 0637 0221) 
 Technology, and Research, Singapore (A*STAR), 8A Biomedical Grove, Immunos, Level 5, Translational Laboratory in Genetic Medicine, Agency for Science, Singapore, Singapore (GRID:grid.185448.4) (ISNI:0000 0004 0637 0221) 
10  The University of Toronto, Program in Developmental & Stem Cell Biology, The Hospital for Sick Children, Department of Molecular Genetics, Toronto, Canada (GRID:grid.17063.33) (ISNI:0000 0001 2157 2938) 
11  Caritas Baby Hospital Bethlehem, Bethlehem, State of Palestine (GRID:grid.17063.33) 
12  Ped Neurology, Staufer Hospital, Schwäbisch-Gmünd, Germany (GRID:grid.17063.33) 
13  Johns Hopkins University School of Medicine, McKusick-Nathans Institute of Genetic Medicine, Baltimore, USA (GRID:grid.21107.35) (ISNI:0000 0001 2171 9311) 
14  Ghent University Hospital, Department of Paediatric Neurology, Ghent, Belgium (GRID:grid.410566.0) (ISNI:0000 0004 0626 3303) 
15  Center for Molecular Neurology, VIB, Antwerp, Belgium (GRID:grid.11486.3a) (ISNI:0000000104788040); University of Antwerp, Laboratory of Neurogenetics, Institute Born-Bunge, Antwerp, Belgium (GRID:grid.5284.b) (ISNI:0000 0001 0790 3681); University Hospital Antwerp, Department of Neurology, Antwerp, Belgium (GRID:grid.411414.5) (ISNI:0000 0004 0626 3418) 
16  Kennedy Krieger Institute, Division of Neurology and Neurogenetics, Baltimore, USA (GRID:grid.240023.7) (ISNI:0000 0004 0427 667X) 
17  KK Women’s and Children’s Hospital, Neurology Service, Department of Paediatrics, Singapore, Singapore (GRID:grid.414963.d) (ISNI:0000 0000 8958 3388) 
18  KK Women’s and Children’s Hospital, Genetics Service, Department of Paediatrics, Singapore, Singapore (GRID:grid.414963.d) (ISNI:0000 0000 8958 3388); Duke-NUS Medical School, Paediatric Academic Clinical Programme, Singapore, Singapore (GRID:grid.428397.3) (ISNI:0000 0004 0385 0924); SingHealth Duke-NUS Genomic Medicine Centre, Singapore, Singapore (GRID:grid.4280.e) (ISNI:0000 0001 2180 6431) 
19  CHU De Nice Hôpital de l’Archet 2, 151 route Saint Antoine de la Ginestière, CS 23079 062002, Service de Génétique Médicale, Nice, France (GRID:grid.410528.a) (ISNI:0000 0001 2322 4179) 
20  Radboud University Medical Center, Department of Pediatric Neurology, Nijmegen, The Netherlands (GRID:grid.10417.33) (ISNI:0000 0004 0444 9382) 
21  University Medical Center Utrecht, Department of Genetics, Utrecht, The Netherlands (GRID:grid.7692.a) (ISNI:0000000090126352) 
22  Keck School of Medicine of University of Southern California, Neurology Division, Childrens Hospital Los Angeles & Department of Neurology, Los Angeles, USA (GRID:grid.42505.36) (ISNI:0000 0001 2156 6853) 
23  Cedars-Sinai Medical Center, Department of Pediatrics, Department of Neurology, & the Board of Governors Regenerative Medicine Institute, Los Angeles, USA (GRID:grid.50956.3f) (ISNI:0000 0001 2152 9905) 
24  Washington University School of Medicine, Division of Genetics and Genomic Medicine, Department of Pediatrics, St. Louis, USA (GRID:grid.4367.6) (ISNI:0000 0001 2355 7002) 
25  Boston Children’s Hospital, Division of Genetics and Genomics and Department of Neurology, Boston, USA (GRID:grid.2515.3) (ISNI:0000 0004 0378 8438) 
26  University Medical Center, Wytemaweg 80, Department of Clinical Genetics, Erasmus MC, Rotterdam, The Netherlands (GRID:grid.5645.2) (ISNI:000000040459992X) 
27  Mayo Clinic, Department of Clinical Genomics, Rochester, USA (GRID:grid.66875.3a) (ISNI:0000 0004 0459 167X) 
28  Ospedale Pediatrico Bambino Gesù, IRCCS, viale San Paolo 15, Genetics and Rare Diseases Research Division, Rome, Italy (GRID:grid.414125.7) (ISNI:0000 0001 0727 6809) 
29  Hadassah-Hebrew University Medical Center, Child Neurology Unit, Jerusalem, Israel (GRID:grid.17788.31) (ISNI:0000 0001 2221 2926) 
30  King Faisal Specialist Hospital and Research Center, Pediatric Neurology, Riyadh, Saudi Arabia (GRID:grid.415310.2) (ISNI:0000 0001 2191 4301) 
31  King Faisal Specialist Hospital and Research Center, Department of Genetics, Riyadh, Saudi Arabia (GRID:grid.415310.2) (ISNI:0000 0001 2191 4301) 
32  King Faisal Specialist Hospital and Research Center, Department of Medical Genetics, Riyadh, Saudi Arabia (GRID:grid.415310.2) (ISNI:0000 0001 2191 4301) 
33  King Fahad Central Hospital in Jizan, Department of Pediatrics, Abu Arish, Saudi Arabia (GRID:grid.415310.2) 
34  King Fahad Medical City, Pediatric Neurology Department, National Neuroscience Institute, Riyadh, Saudi Arabia (GRID:grid.415277.2) (ISNI:0000 0004 0593 1832) 
35  Children’s Hospital, King Fahad Medical City, Section of Medical Genetics, Riyadh, Saudi Arabia (GRID:grid.415277.2) (ISNI:0000 0004 0593 1832) 
36  King Fahad Medical City, General Pediatrics and Adolescents, Riyadh, Saudi Arabia (GRID:grid.415277.2) (ISNI:0000 0004 0593 1832) 
37  Neuroscience Department King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia (GRID:grid.415310.2) (ISNI:0000 0001 2191 4301) 
38  The Children’s Hospital of Philadelphia, Division of Neurology, Philadelphia, USA (GRID:grid.239552.a) (ISNI:0000 0001 0680 8770) 
39  Radboud University Medical Center, Department of Human Genetics, Nijmegen, The Netherlands (GRID:grid.10417.33) (ISNI:0000 0004 0444 9382) 
40  Institute of Medical Genetics and Applied Genomics (Tübingen) and Centogene AG (Rostock), Rostock, Germany (GRID:grid.10417.33) 
41  University of Tübingen, Department of Pediatric Neurology, Tübingen, Germany (GRID:grid.10392.39) (ISNI:0000 0001 2190 1447) 
42  Institute of Medical Genetics and Applied Genomics (Tübingen) and Centogene AG (Rostock), Rostock, Germany (GRID:grid.10392.39) 
43  A*STAR, Biopolis, Institute of Molecular and Cell Biology, Singapore, Singapore (GRID:grid.185448.4) (ISNI:0000 0004 0637 0221) 
44  Division of Clinical Genomics, Ambry Genetics, Aliso Viejo, USA (GRID:grid.465138.d) (ISNI:0000 0004 0455 211X) 
45  APHP, GH Pitié Salpêtrière, Department of Genetics, Unit of Development Genomics, Paris, France (GRID:grid.411439.a) (ISNI:0000 0001 2150 9058) 
46  Hadassah-Hebrew University Medical Center, Department of Genetic and Metabolic Diseases, Jerusalem, Israel (GRID:grid.17788.31) (ISNI:0000 0001 2221 2926) 
47  GeneDx, 207 Perry Parkway, Gaithersburg, USA (GRID:grid.428467.b) 
48  Technology, and Research, Singapore (A*STAR), 8A Biomedical Grove, Immunos, Level 5, Translational Laboratory in Genetic Medicine, Agency for Science, Singapore, Singapore (GRID:grid.185448.4) (ISNI:0000 0004 0637 0221); National University of Singapore, Department of Physiology, Singapore, Singapore (GRID:grid.4280.e) (ISNI:0000 0001 2180 6431); National University of Singapore, Department of Medicine, Singapore, Singapore (GRID:grid.4280.e) (ISNI:0000 0001 2180 6431) 
49  A*STAR, Biopolis, Institute of Molecular and Cell Biology, Singapore, Singapore (GRID:grid.185448.4) (ISNI:0000 0004 0637 0221); Duke-NUS Medical School, Program in Neuroscience and Behavioral Disorders, Singapore, Singapore (GRID:grid.428397.3) (ISNI:0000 0004 0385 0924) 
50  Donders Center for Brain, Cognition, and Behavior, Department of Neurology, Nijmegen, The Netherlands (GRID:grid.428397.3); Translational Metabolic Laboratory, Department of Laboratory Medicine, Nijmegen, The Netherlands (GRID:grid.428397.3) 
51  Yale-NUS College, 12 College Avenue West, Biopolis, Singapore, Singapore (GRID:grid.463064.3) (ISNI:0000 0004 4651 0380); A*STAR, Biopolis, Institute of Molecular and Cell Biology, Singapore, Singapore (GRID:grid.185448.4) (ISNI:0000 0004 0637 0221) 
52  Yong Loo Lin School of Medicine, Biopolis, National University of Singapore, Department of Paediatrics, Singapore, Singapore (GRID:grid.4280.e) (ISNI:0000 0001 2180 6431); A*STAR, Biopolis, Institute of Molecular and Cell Biology, Singapore, Singapore (GRID:grid.185448.4) (ISNI:0000 0004 0637 0221) 
53  KK Women’s and Children’s Hospital, Genetics Service, Department of Paediatrics, Singapore, Singapore (GRID:grid.414963.d) (ISNI:0000 0000 8958 3388); Duke-NUS Medical School, Paediatric Academic Clinical Programme, Singapore, Singapore (GRID:grid.428397.3) (ISNI:0000 0004 0385 0924); SingHealth Duke-NUS Genomic Medicine Centre, Singapore, Singapore (GRID:grid.4280.e) (ISNI:0000 0001 2180 6431); SingHealth Duke-NUS Institute of Precision Medicine, Singapore, Singapore (GRID:grid.4280.e) (ISNI:0000 0001 2180 6431) 
54  Institute of Medical Biology, A*STAR, Biopolis, Singapore, Singapore (GRID:grid.414735.0) (ISNI:0000 0004 0367 4692); Yong Loo Lin School of Medicine, Biopolis, National University of Singapore, Department of Paediatrics, Singapore, Singapore (GRID:grid.4280.e) (ISNI:0000 0001 2180 6431); A*STAR, Biopolis, Institute of Molecular and Cell Biology, Singapore, Singapore (GRID:grid.185448.4) (ISNI:0000 0004 0637 0221); Koç University School of Medicine, Medical Genetics Department, Istanbul, Turkey (GRID:grid.15876.3d) (ISNI:0000000106887552); Academic Medical Center (AMC), Meibergdreef 9, Reproductive Biology Laboratory, Obstetrics and Gynaecology, Amsterdam-Zuidoost, The Netherlands (GRID:grid.5650.6) (ISNI:0000000404654431) 
Publication year
2020
Publication date
2020
Publisher
Nature Publishing Group
e-ISSN
20411723
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
2348777767
Copyright
This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.