Abstract

The vitamin D receptor is highly expressed in the gastrointestinal tract where it transacts gene expression. With current limited understanding of the interactions between the gut microbiome and vitamin D, we conduct a cross-sectional analysis of 567 older men quantifying serum vitamin D metabolites using LC-MSMS and defining stool sub-Operational Taxonomic Units from16S ribosomal RNA gene sequencing data. Faith’s Phylogenetic Diversity and non-redundant covariate analyses reveal that the serum 1,25(OH)2D level explains 5% of variance in α-diversity. In β-diversity analyses using unweighted UniFrac, 1,25(OH)2D is the strongest factor assessed, explaining 2% of variance. Random forest analyses identify 12 taxa, 11 in the phylum Firmicutes, eight of which are positively associated with either 1,25(OH)2D and/or the hormone-to-prohormone [1,25(OH)2D/25(OH)D] “activation ratio.” Men with higher levels of 1,25(OH)2D and higher activation ratios, but not 25(OH)D itself, are more likely to possess butyrate producing bacteria that are associated with better gut microbial health.

Here, the authors investigate associations of vitamin D metabolites with gut microbiome in a cross-sectional analysis of 567 elderly men enrolled in the Osteoporotic Fractures in Men (MrOS) Study and find larger alpha-diversity correlates with high 1,25(OH)2D and high 24,25(OH)2D and higher ratios of activation and catabolism.

Details

Title
Vitamin D metabolites and the gut microbiome in older men
Author
Thomas, Robert L 1 ; Jiang Lingjing 2 ; Adams, John S 3   VIAFID ORCID Logo  ; Xu Zhenjiang Zech 4 ; Shen, Jian 2 ; Janssen, Stefan 5   VIAFID ORCID Logo  ; Ackermann, Gail 6 ; Vanderschueren Dirk 7 ; Pauwels, Steven 8 ; Knight, Rob 9   VIAFID ORCID Logo  ; Orwoll, Eric S 10   VIAFID ORCID Logo  ; Kado, Deborah M 11   VIAFID ORCID Logo 

 University of California San Diego, Department of Medicine, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242) 
 University of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242) 
 Departments of Orthopaedic Surgery and Molecular, Cell and Developmental Biology at UCLA, Los Angeles, USA (GRID:grid.19006.3e) (ISNI:0000 0000 9632 6718) 
 Nanchang University, State Key Laboratory of Food Science and Technology, Nanchang, China (GRID:grid.260463.5) (ISNI:0000 0001 2182 8825) 
 Justus-Liebig-University, Algorithmic Bioinformatics, Department of Biology and Chemistry, Gießen, Germany (GRID:grid.8664.c) (ISNI:0000 0001 2165 8627) 
 University of California San Diego, Department of Pediatrics, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242) 
 KU Leuven, Department of Chronic Diseases, Metabolism and Ageing (CHROMETA), Laboratory of Clinical and Experimental Endocrinology, Leuven, Belgium (GRID:grid.5596.f) (ISNI:0000 0001 0668 7884); University Hospitals Leuven, Department of Laboratory Medicine, Leuven, Belgium (GRID:grid.410569.f) (ISNI:0000 0004 0626 3338) 
 University Hospitals Leuven, Department of Laboratory Medicine, Leuven, Belgium (GRID:grid.410569.f) (ISNI:0000 0004 0626 3338); KU Leuven, Department of Cardiovascular Sciences, Leuven, Belgium (GRID:grid.5596.f) (ISNI:0000 0001 0668 7884); Jessa Hospital, Department of Laboratory Medicine, Hasselt, Belgium (GRID:grid.414977.8) (ISNI:0000 0004 0578 1096) 
 University of California San Diego, Department of Pediatrics, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); UC San Diego Center for Microbiome Innovation, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); University of California San Diego, Department of Bioengineering, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); University of California San Diego, Department of Computer Science and Engineering, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242) 
10  Bone and Mineral Unit, Oregon Health & Sciences University, Department of Medicine, Portland, USA (GRID:grid.5288.7) (ISNI:0000 0000 9758 5690) 
11  University of California San Diego, Department of Medicine, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242); University of California San Diego, Herbert Wertheim School of Public Health and Human Longevity Science, La Jolla, USA (GRID:grid.266100.3) (ISNI:0000 0001 2107 4242) 
Publication year
2020
Publication date
2020
Publisher
Nature Publishing Group
e-ISSN
20411723
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
2473267450
Copyright
© The Author(s) 2020. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.