Abstract

Several mechanisms driving SARS-CoV-2 transmission remain unclear. Based on individual records of 1178 potential SARS-CoV-2 infectors and their 15,648 contacts in Hunan, China, we estimated key transmission parameters. The mean generation time was estimated to be 5.7 (median: 5.5, IQR: 4.5, 6.8) days, with infectiousness peaking 1.8 days before symptom onset, with 95% of transmission events occurring between 8.8 days before and 9.5 days after symptom onset. Most transmission events occurred during the pre-symptomatic phase (59.2%). SARS-CoV-2 susceptibility to infection increases with age, while transmissibility is not significantly different between age groups and between symptomatic and asymptomatic individuals. Contacts in households and exposure to first-generation cases are associated with higher odds of transmission. Our findings support the hypothesis that children can effectively transmit SARS-CoV-2 and highlight how pre-symptomatic and asymptomatic transmission can hinder control efforts.

Detailed knowledge of COVID-19 epidemiology is needed to inform public health responses. Here, the authors use large-scale contact tracing data to provide empirical estimates of key parameters, and show that susceptibility increases with age but transmissibility does not vary significantly.

Details

Title
Infectivity, susceptibility, and risk factors associated with SARS-CoV-2 transmission under intensive contact tracing in Hunan, China
Author
Hu Shixiong 1 ; Wang, Wei 2 ; Wang, Yan 2 ; Litvinova, Maria 3   VIAFID ORCID Logo  ; Luo Kaiwei 1 ; Ren Lingshuang 2 ; Sun Qianlai 1 ; Chen Xinghui 2 ; Zeng Ge 1 ; Li, Jing 2 ; Lu, Liang 4 ; Deng Zhihong 1 ; Zheng, Wen 2 ; Li, Mei 2 ; Yang, Hao 1 ; Guo Jinxin 2 ; Wang, Kai 2 ; Chen, Xinhua 2 ; Liu Ziyan 1 ; Han, Yan 2 ; Shi, Huilin 2 ; Chen, Zhiyuan 2 ; Zhou, Yonghong 2 ; Sun Kaiyuan 5 ; Vespignani Alessandro 6 ; Viboud Cécile 5 ; Gao Lidong 1 ; Ajelli Marco 7   VIAFID ORCID Logo  ; Yu, Hongjie 8   VIAFID ORCID Logo 

 Hunan Provincial Center for Disease Control and Prevention, Hunan Workstation for Emerging Infectious Disease Control and Prevention, Chinese Academy of Medical Sciences, Changsha, China (GRID:grid.508374.d) 
 Fudan University, Key Laboratory of Public Health Safety, Ministry of Education, School of Public Health, Shanghai, China (GRID:grid.8547.e) (ISNI:0000 0001 0125 2443) 
 Indiana University School of Public Health, Department of Epidemiology and Biostatistics, Bloomington, USA (GRID:grid.411377.7) (ISNI:0000 0001 0790 959X); ISI Foundation, Turin, Italy (GRID:grid.418750.f) (ISNI:0000 0004 1759 3658) 
 Sichuan University, West China School of Public Health and West China Fourth Hospital, Chengdu, China (GRID:grid.13291.38) (ISNI:0000 0001 0807 1581) 
 Fogarty International Center, National Institutes of Health, Division of International Epidemiology and Population Studies, Bethesda, USA (GRID:grid.453035.4) (ISNI:0000 0004 0533 8254) 
 ISI Foundation, Turin, Italy (GRID:grid.418750.f) (ISNI:0000 0004 1759 3658); Northeastern University, Laboratory for the Modeling of Biological and Socio-technical Systems, Boston, USA (GRID:grid.261112.7) (ISNI:0000 0001 2173 3359) 
 Indiana University School of Public Health, Department of Epidemiology and Biostatistics, Bloomington, USA (GRID:grid.411377.7) (ISNI:0000 0001 0790 959X); Northeastern University, Laboratory for the Modeling of Biological and Socio-technical Systems, Boston, USA (GRID:grid.261112.7) (ISNI:0000 0001 2173 3359) 
 Fudan University, Key Laboratory of Public Health Safety, Ministry of Education, School of Public Health, Shanghai, China (GRID:grid.8547.e) (ISNI:0000 0001 0125 2443); Fudan University, Department of Infectious Diseases, Huashan Hospital, Shanghai, China (GRID:grid.8547.e) (ISNI:0000 0001 0125 2443); Shanghai Key Laboratory of Infectious Diseases and Biosafety Emergency Response, Shanghai, China (GRID:grid.8547.e); Shanghai Institute of Infectious Disease and Biosecurity, Fudan University, Shanghai, China (GRID:grid.8547.e) (ISNI:0000 0001 0125 2443) 
Publication year
2021
Publication date
2021
Publisher
Nature Publishing Group
e-ISSN
20411723
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
2499223262
Copyright
© The Author(s) 2021. corrected publication 2021. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.