Abstract

Abstract

In structural biology, most figures of macromolecules are aimed at those well-versed in structure, requiring prior familiarity with scales and commonly used color schemes. Yet, as structural biology becomes democratized with the increasing pace of structure determination, the accessibility of structural data is paramount. Here, we identify three keys, and have written accompanying software plugins, for structural biologists to create figures truer to the hard-won data and clearer across different modes of color vision and to non-expert readers.

1. Use perceptually uniform colormaps

2. Consider readers with different modes of color vision

3. Be explicit about scales and color usage

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

* https://github.com/smsaladi/pymol_viridis

* https://github.com/smsaladi/chimerax_viridis

* https://github.com/smsaladi/vmd_viridis

* https://github.com/smsaladi/structure_scales

Details

Title
Structural biologists, let’s mind our colors
Author
Saladi, Shyam M; Maggiolo, Ailiena O; Radford, Kate; Clemons, William M, Jr
University/institution
Cold Spring Harbor Laboratory Press
Section
New Results
Publication year
2020
Publication date
Sep 24, 2020
Publisher
Cold Spring Harbor Laboratory Press
ISSN
2692-8205
Source type
Working Paper
Language of publication
English
ProQuest document ID
2508140277
Copyright
© 2020. This article is published under http://creativecommons.org/licenses/by/4.0/ (“the License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.