1 Introduction
Highly oxygenated organic molecules (HOM) are an important class of compound formed in the oxidation of volatile organic compounds (VOC), including biogenic VOC (BVOC) and anthropogenic VOC (Crounse et al., 2013; Ehn et al., 2014; Jokinen et al., 2014; Rissanen et al., 2014; Jokinen et al., 2015; Krechmer et al., 2015; Mentel et al., 2015; Rissanen et al., 2015; Kenseth et al., 2018; Molteni et al., 2018; Garmash et al., 2020; McFiggans et al., 2019; Molteni et al., 2019; Quéléver et al., 2019). A number of recent studies have demonstrated that HOM play a pivotal role in both nucleation and also particle growth of pre-existing particles, thus contributing to secondary organic aerosol (SOA) (Ehn et al., 2014; Kirkby et al., 2016; Tröstl et al., 2016). Particularly, in the early stage of aerosol growth, HOM may contribute a significant fraction of SOA mass (Tröstl et al., 2016).
HOM are formed by the autoxidation of peroxy radicals (RO), which means they undergo intramolecular H shift forming alkyl radicals, followed by O addition leading to formation of new RO as shown below (Vereecken et al., 2007; Crounse et al., 2013; Ehn et al., 2017; Bianchi et al., 2019; Møller et al., 2019; Nozière and Vereecken, 2019; Vereecken and Nozière, 2020).
Besides autoxidation, the RO can also react with HO, RO, and NO, either forming a series of termination products (Reactions R1–3), including organic hydroxyperoxide, alcohol, and carbonyl, or forming alkoxy radicals (RO, Reactions R4–5) via the following reactions. The termination products are detected in the mass spectra at masses , , and , respectively, with being the molecular mass of the parent RO (Ehn et al., 2014; Mentel et al., 2015). In case RO is an acyl peroxy radical, percarboxylic acids and carboxylic acids are formed instead of hydroperoxides and alcohols in Reactions (R3) and (R1), respectively (Atkinson et al., 2006; Mentel et al., 2015). RO can also form HOM dimers by the accretion reaction of two RO: Reaction (R6) (Berndt et al., 2018a, b; Valiev et al., 2019). Additionally, HOM can be formed via H shift in RO followed by O addition (referred to as the “alkoxy-proxy” pathway) (Finlayson-Pitts and Pitts, 2000; Vereecken and Peeters, 2010; Vereecken and Francisco, 2012; Mentel et al., 2015). These pathways are summarized in a recent comprehensive review (Bianchi et al., 2019), which also further clarifies HOM definition.
Currently, most laboratory studies of HOM formation focus on the VOC oxidation by OH and O (Crounse et al., 2013; Ehn et al., 2014; Jokinen et al., 2014; Rissanen et al., 2014; Jokinen et al., 2015; Krechmer et al., 2015; Mentel et al., 2015; Rissanen et al., 2015; Kirkby et al., 2016; Tröstl et al., 2016; Kenseth et al., 2018; Molteni et al., 2018; Garmash et al., 2020; McFiggans et al., 2019; Molteni et al., 2019; Quéléver et al., 2019; Wang et al., 2020; Yan et al., 2020). HOM formation in the oxidation of VOC with NO has received much less attention. NO is another important oxidant of VOC mainly operating during nighttime. Particularly, NO has high reactivity with unsaturated BVOC such as monoterpene and isoprene. It is often the dominant oxidant of these compounds at night, especially in regions where biogenic and anthropogenic emissions mix (Geyer et al., 2001; Brown et al., 2009, 2011). The reaction products contribute to SOA formation (Xu et al., 2015; Lee et al., 2016). Also, the organic nitrates produced in these reactions play an important role in nitrogen chemistry by altering NO concentration, which further influences photochemical recycling and ozone formation on the next day. Among these reaction products, HOM can also be formed (Xu et al., 2015; Lee et al., 2016; Yan et al., 2016). Despite the potential importance, studies of HOM formation in the oxidation of BVOC by NO are still limited compared with the HOM formation via oxidation by O and OH. Although a number of laboratory studies have investigated the reaction of NO with BVOC (Ng et al., 2008; Fry et al., 2009; Rollins et al., 2009; Fry et al., 2011; Kwan et al., 2012; Fry et al., 2014; Boyd et al., 2015; Schwantes et al., 2015; Nah et al., 2016; Boyd et al., 2017; Claflin and Ziemann, 2018; Faxon et al., 2018; Draper et al., 2019; Takeuchi and Ng, 2019; Novelli et al., 2021; Vereecken et al., 2021), these studies mostly focus on either SOA yield and composition or on the gas-phase chemistry mechanism mainly for “traditional” oxidation products that stem from a few oxidation steps.
Importantly, HOM formation in the reaction of NO with isoprene, the most abundant BVOC accounting for more than half of the global BVOC emissions, has not been explicitly addressed yet, to the best of our knowledge. Although isoprene from plants is mainly emitted under light conditions, i.e., in the daytime, isoprene can remain high after sunset in significant concentrations (Starn et al., 1998; Stroud et al., 2002; Brown et al., 2009) because of the reduced consumption by OH and is found to decay rapidly. A substantial fraction of isoprene can then be oxidized by NO (Brown et al., 2009). Regarding the budget of NO, the reaction of isoprene with NO can contribute a significant or even dominant fraction of NO loss at night in regions where VOC is dominated by isoprene such as the northeastern US (Brown et al., 2009). Under some circumstances, the reaction of isoprene with NO can contribute a significant fraction during the afternoon and afterwards (Ayres et al., 2015; Hamilton et al., 2021). The reaction of isoprene with NO is the subject of a number of studies (Ng et al., 2008; Perring et al., 2009; Rollins et al., 2009; Kwan et al., 2012; Schwantes et al., 2015; Vereecken et al., 2021). These studies focus on the oxidation mechanism and “traditional” oxidation products, as well as SOA yields. The initial step is the NO addition to one of the C C double bounds, preferentially to the carbon C1 (Schwantes et al., 2015), followed by O addition forming a nitrooxyalkyl peroxy radical (RO). This RO can undergo the reactions described above, forming a series of products such as C5-nitrooxyhydroperoxide, C5-nitrooxycarbonyl, and C5-hydroxynitrate (Ng et al., 2008; Kwan et al., 2012) as well as methyl vinyl ketone (MVK), potentially methacrolein (MACR), formaldehyde, OH radical, and NO as minor products (Schwantes et al., 2015). A high nitrate yield (57 %–95 %) was found (Perring et al., 2009; Rollins et al., 2009; Kwan et al., 2012; Schwantes et al., 2015). Products in the particle phase such as C dimers were also detected (Ng et al., 2008; Kwan et al., 2012; Schwantes et al., 2015). The SOA yield varies from 2 % to 23.8 % depending on the organic aerosol concentration (Ng et al., 2008; Rollins et al., 2009). These studies have provided valuable insights into oxidation mechanism, particle yield, and composition. However, because HOM formation was not the focus of these studies, only a limited number of products, mainly moderately oxygenated ones (oxygen number in addition to NO functional groups), were detected in the gas phase. The detailed mechanism of HOM formation and their yields in the reaction of BVOCNO are still unclear.
In this study, we investigated the HOM formation in the oxidation of isoprene by NO. We report the identification of HOM, including HOM monomers, dimers, and trimers. According to the reaction products and the literature, we discuss the formation mechanism of these HOM. The formation mechanism of various HOM is further constrained with time series of HOM upon repeated isoprene additions. We also provide an estimate of HOM yield in the isoprene NO reaction and assess their roles in SOA formation.
2 Experimental
2.1 Chamber setup and experiments
Experiments investigating the reaction of isoprene with NO were conducted in the SAPHIR chamber (Simulation of Atmospheric PHotochemistry In a large Reaction chamber) at the Forschungszentrum Jülich, Germany. The details of the chamber have been described before (Rohrer et al., 2005; Zhao et al., 2015a, b, 2018). Briefly, SAPHIR is a Teflon chamber with a volume of 270 m. It can utilize natural sunlight for illumination and is equipped with a louvre system to switch between light and dark conditions. In this study, the experiments were conducted in the dark with the louvres closed.
Temperature and relative humidity were continuously measured. Gas- and particle-phase species were characterized using a comprehensive set of instruments with the details described before (Zhao et al., 2015b). VOC were characterized using a Proton Transfer Reaction Time-of-Flight Mass Spectrometer (PTR-ToF-MS, Ionicon Analytik, Austria). NO and O concentrations were measured using a chemiluminescence NO analyzer (ECO PHYSICS TR480) and a UV photometer O analyzer (ANSYCO, model O341M), respectively. OH, HO, and RO concentrations were measured using a laser-induced fluorescence system (LIF) (Fuchs et al., 2012). NO and NO were detected by a custom-built instrument based on cavity ring-down spectroscopy. The design of the instrument is similar to that described by Wagner et al. (2011). NO was directly detected in one cavity by its absorption at 662 nm and the sum of NO and NO in a second, heated cavity, which had a heated inlet to thermally decompose NO to NO. The sampling flow rate was 3 to 4 L/min. The detection by cavity ring-down spectroscopy was achieved by a diode laser that was periodically switched on and off with a repetition rate of 200 Hz. Ring-down events were observed by a digital oscilloscope PC card during the time when the laser was switched off and were averaged over 1 s. The zero-decay time that is needed to calculate the concentration of NO was measured every 20 s by chemically removing NO in the reaction with excess nitric oxide (NO) in the inlet system. The accuracy of measurements was limited by the uncertainty in the correction for inlet losses of NO and NO. In the case of NO a transmission of (85 10) % was achieved and, in the case of NO, (50 30) %.
Before an experiment, the chamber was flushed with high-purity synthetic air (purity % O and N). Experiments were conducted under dry conditions (RH 2 %), and temperature was at 302 3 K. NO and O were added to the chamber first to form NO and NO, reaching concentrations of ppb for NO and ppb for O. After around half an hour, isoprene was sequentially added into the chamber for three times at intervals of h. Around 40 min after the third isoprene injection, NO was added to compensate for the loss of NO and NO. Afterwards, three isoprene additions were repeated in the same way as before. O was added before the fifth and sixth isoprene additions to compensate for its loss by reaction. The schematic for the experimental procedure is shown in Fig. S1. Experiments were designed such that the chemical system was dominated by the reaction of isoprene with NO and the reaction of isoprene with O did not play a major role ( % of the isoprene consumption). Figure S2 shows the relative contributions of the reaction of O and NO with isoprene to the total chemical loss of isoprene using the NO and O concentrations measured. The reaction with NO accounted for % of the isoprene consumption for the whole experiment periods. The contribution of the reaction of isoprene with a trace amount of OH, mainly produced in the reaction of isoprene O via Criegee intermediates (Nguyen et al., 2016), is negligible as the OH yield is less than one (Malkin et al., 2010), and thus its contribution is less than that of isoprene O. This is consistent with the contribution determined using measured OH concentration, despite some uncertainty in measured OH concentration due to the interference from NO. In these experiments, RO fate is estimated to be dominated by its reaction with NO according to the measured NO, RO, and HO concentrations and their rate constants for the reactions with RO (MCM v3.2; Jenkin et al., 1997, 2003; Saunders et al., 2003; Jenkin et al., 2015, via the website:
2.2 Characterization of HOM
In this study we refer to a similar definition for HOM by Bianchi et al. (2019); i.e., HOM typically contain six or more oxygen atoms formed via autoxidation and related chemistry of peroxy radicals. HOM were detected using a Chemical Ionization time-of-flight Mass Spectrometer (Aerodyne Research Inc., USA) with nitrate as the reagent ion (CIMS) (Eisele and Tanner, 1993; Jokinen et al., 2012). N nitric acid was used to produce NO in order to distinguish the NO group into target molecules formed in the reaction from the reagent ion. The details of the instrument are described in our previous publications (Ehn et al., 2014; Mentel et al., 2015; Pullinen et al., 2020). The CIMS has a mass resolution of (m/dm). Examples of peak fitting are shown in Fig. S3. HOM concentrations were estimated using the calibration coefficient of HSO as described by Pullinen et al. (2020) because the charge efficiency of HOM and HSO can be assumed to be equal and close to the collision limit (Ehn et al., 2014; Pullinen et al., 2020). The details of the calibration with HSO are provided in Supplement Sect. S1. Since HOM contain more than six oxygen atoms and their clusters with nitrate ions are quite stable (Ehn et al., 2014), the charge efficiency of HOM is thus assumed to be equal to that of HSO, which is close to the collision limit (Viggiano et al., 1997). If HOM do not charge with nitrate ions at their collision limit or the clusters formed break during the short residence time in the charger, its concentration would be underestimated as pointed out by Ehn et al. (2014). Thus, our assumption provides a lower limit of the HOM concentration. The HOM yield was derived using the concentration of the HOM produced, divided by the concentration of isoprene that was consumed by NO. The uncertainty of HOM yield was estimated to %/ %. The loss of HOM to the chamber was corrected using a wall loss rate of 6 10 s as quantified previously (Zhao et al., 2018). HOM concentrations were also corrected for dilution due to the replenishment flow needed to maintain a constant overpressure of the chamber (loss rate 10 s) (Zhao et al., 2015b). The influence of wall loss correction and dilution correction on HOM yield was % and %, respectively. Although the wall loss rate of vapors in this study might not be exactly the same as in our previous photooxidation experiments (Zhao et al., 2018), HOM yield is not sensitive to the vapor wall loss rate. An increase in wall loss rate by 100 % or a decrease by 50 % only changes the HOM yield by 11 % and %, respectively.
3 Results and discussion
3.1 Overview of HOM
The mass spectra of HOM in the gas phase formed in the oxidation of isoprene by NO are shown in Fig. 1. A large number of HOM were detected. Almost all peaks are assigned HOM containing nitrogen atoms, with possibly few exceptions such as CHO and CHO with very minor peaks ( % of the maximum peak). The reaction products can be roughly divided into three classes: monomers (C5, –400 Th), dimers (C10, –600 Th), and trimers (C15, Th), according to their mass-to-charge ratio (). The detailed peak assignment of monomers, dimers, and trimers is discussed in the following sections.
Figure 1
Mass spectrum of the HOM formed in the oxidation of isoprene by NO. HOM are detected as clusters with the reagent ion NO, which is not shown in the molecular formula in the figure for simplicity. Panels (a) and (b) show the average spectrum during the first isoprene addition period (P1) and for the whole period of six isoprene additions (P1–6), respectively. The insets show the contributions of different classes of HOM. 1–3N-monomer refers to the monomers containing one to three nitrogen atoms in the molecular formula.
[Figure omitted. See PDF]
3.2 HOM monomers and their formation3.2.1 Overview of HOM monomers
HOM monomers showed a roughly repeating pattern in the mass spectrum at every 16 Th (corresponding to the mass of oxygen) (Fig. 1a). Here a number of series of HOM monomers with continuously increasing oxygenation were found, such as CHNO, CHNO, CHNO, and CHNO (Tables 1 and S1–2 and Fig. 2). These monomers included both stable closed-shell molecules and open-shell radicals, such as CHNO and CHNO. The open-shell molecules were likely RO radicals because of their much longer lifetime and hence higher concentrations compared with alkoxy radicals (RO) and alkyl radicals (R). Since the observed stable products were mostly termination products of RO reactions, we describe the stable products in a RO-oriented approach. It is worth noting that some of the termination products may contain multiple isomers formed from different pathways.
Figure 2
Kendrick mass defect plot for O of HOM monomers. The in the molecular formula includes the reagent ion NO, which is not shown for simplicity. The size (area) of circles is set to be proportional to the average peak intensity of each molecular formula during the first isoprene addition period (P1). The species at 351 and 353 (labeled in grey) are the adducts of CHNO and CHNO with H[15N]O, respectively. The blue dashed lines with arrows indicate the termination products hydroperoxide (), alcohol (), and ketone (), with the molecular formula of a HOM RO.
[Figure omitted. See PDF]
Table 1HOM monomers formed in the oxidation of isoprene by NO.
Series number | Product | Type | Pathway of RO |
---|---|---|---|
M1a/b | CHNO | RO | |
CHNO | ROOH/ROH | IsopreneNO | |
CHNO | RO | IsopreneNONO | |
M2a/b | CHNO | RO | |
CHNO | ROOH/ROH | IsopreneNONO | |
CHNO | RO | ||
CHNO | RONO | ||
M3 | CHNO | RO | |
CHNO | ROOH/ROH | IsopreneNONO | |
CHNO | RO | ||
M4 | CHNO | RO | |
CHNO | ROOH/ROH | IsopreneNOOH | |
CHNO | RO |
RO denotes peroxy radical, and ROOH, ROH, RO, and RONO denote the termination products containing hydroperoxy, hydroxyl, carbonyl group, and peroxynitrate, respectively. Peak assignment of compounds with may be subject to uncertainties.
HOM monomers were classified into 1N-, 2N-, and 3N-monomers according to the number of nitrogen atoms that they contain. HOM without nitrogen atoms were barely observed except for very minor peaks ( % of the maximum peak) possibly assigned to CHO and CHO. The contribution of 2N-monomers such as CHNO and CHNO was higher than that of the 1N-HOM monomers, and that of 3N-monomers was the lowest (Fig. 1, inset). The most abundant monomers were CHNO, CHNO, and CHNO. The termination products of CHNO, CHNO, and CHNO also showed relatively high abundance. These limited numbers of compounds dominated the HOM monomers. Since 2N-monomers were second-generation products as discussed below, the higher-abundance 2N-monomers indicate that the second-generation HOM play an important role in the reaction of NO with isoprene in the reaction conditions of our study, as also seen by Wu et al. (2020). This is more evident for the mass spectrum averaged over six isoprene addition periods (Fig. 1b), where the abundances of CHNO and CHNO were more dominant. This observation is in contrast with the finding for the reaction of O with BVOC, which contains only one double bond such as -pinene (Ehn et al., 2014), where HOM are mainly first-generation products formed via autoxidation. The higher abundance of HOM 2N-monomers than 1N-monomers is likely because HOM production rate via the autoxidation of 1N-monomer RO following the reaction of isoprene with NO may be slower than that of the reaction of 1N-monomers (including both HOM and non-HOM monomers) with NO. We would like to note that some less oxygenated 1N-monomers such as CHNO and CHNO may have high abundance but are not detected by NO-CIMS and are not HOM and thus not included in HOM 1N-monomers.
3.2.2 1N-monomersIn our experiments we observed a CHNO (–12) series (series M1) as well as its corresponding termination products CHNO, CHNO, and CHNO via the reactions with RO and HO, which contain carbonyl, hydroxyl, and hydroperoxy group, respectively. Overall, the peak intensities of CHNO and CHNO series first increased and then decreased as oxygen number increased (Fig. 2), with the peak intensity of CHNO and CHNO being the highest within their respective series when averaged over the whole experiment period.
CHNO with odd numbers of oxygen atoms (, 9, 11, series M1a) were possibly formed by the attack of NO to one double bond, preferentially to C1 according to previous studies (Skov et al., 1992; Berndt and Böge, 1997; Schwantes et al., 2015) and followed by autoxidation (Scheme 1a). We would like to note that NO-CIMS only observed HOM with oxygen numbers in this study due to its selectivity of detection. CHNO with even numbers of oxygen atoms (, 10, series M1b in Table 1) were possibly formed after H shift of an alkoxy radical formed in Reactions (R4) or (R5) and subsequent O addition (“alkoxy–peroxy” channel) (Scheme 1b), where the alkoxy radicals can be formed from both the and reactions. The hydroxy RO formed can undergo further autoxidation, adding two oxygen atoms after each H shift. We would like to note that the scheme and other schemes in this study only show example isomers and pathways to form these molecules. It is likely that many of the reactions occurring are not the dominant channels as otherwise there would be much higher HOM yield as discussed below.
Scheme 1
The example pathways to form HOM RO CHNO (, 9, 11) series (a) and CHNO (, 10) series (b) in the reaction of isoprene with NO. The detected products are in bold.
[Figure omitted. See PDF]
Some HOM monomers may contain multiple isomers and be formed via different pathways. For example, CHNO can contain alcohols derived from RO CHNO, hydroperoxides derived from RO CHNO, or the ketones from ROCHNO. Some RO CHNO may be formed via the reaction of first-generation products with NO in addition to direct reaction of isoprene with NO. For example, CHNO can be formed by the reaction of NO with CHO, which is a first-generation product observed previously in the reaction of isoprene with NO or OH (Scheme S1b) (Kwan et al., 2012). Moreover, RO CHNO can be formed from C5-carbonylnitrate, a first-generation product, with OH (Scheme S1a). Trace amount of OH can be produced in the reaction of isoprene with NO (Kwan et al., 2012; Wennberg et al., 2018). OH can also be formed via Criegee intermediates formed in the isoprene O reaction (Nguyen et al., 2016), but this OH source was likely minor because the contribution of the isoprene O reaction to total isoprene loss was negligible ( %, Fig. S2). In addition, CHNO may also be formed by the reaction of NO with CHO, which is a first-generation product observed in the reaction of isoprene with OH (Kwan et al., 2012). The CHNO formed via direct reaction of isoprene with NO is a first-generation RO, while that formed via other indirect pathways is a second-generation RO. The time profiles of the isomers from these two pathways, however, are expected to be different, as will be discussed below.
Time series of HOM can shed light on their formation mechanisms. It is expected that first-generation products will increase quickly with isoprene addition and reach a maximum earlier in the presence of wall loss of organic vapor, while second-generation products will reach a maximum in the later stage or increase continuously if the production rate is higher than the loss rate. As a reference to analyze the time profiles of HOM, the time profiles of isoprene, NO, and NO are also shown (Fig. S4). After isoprene was added in each period, NO and NO dropped dramatically and then gradually increased. We found that termination products within the same M1 series showed different time profiles. For example, in CHNO series, CHNO clearly increased instantaneously with isoprene addition and decreased quickly afterwards (Fig. 3a), indicating that it was a first-generation product, which was expected according to mechanism Scheme 1. CHNO and CHNO had a general increasing trend with time. While CHNO increased continuously with time, CHNO reached maximum intensity in the late phase of each isoprene addition period and then decreased naturally or after isoprene addition. The faster loss of CHNO than CHNO may result from the faster wall loss due to its lower volatility. CHNO and CHNO showed a mixing time profile with features of the former two kinds of time profiles, increasing almost instantaneously with isoprene additions, especially in the first two periods, while increasing continuously or decreasing first with isoprene additions and then increasing later in each period. This kind of time series indicates that there were significant contributions from both first- and second-generation products.
Figure 3
Time series of peak intensity of several HOM monomers of CHNO series (a) and of CHNO series (b). They are likely the termination products of RO CHNO and CHNO, respectively. The dashed lines indicate the time of isoprene additions. The long-dashed arrow indicates the time of NO addition. The dash-dotted arrows indicate the time of O additions.
[Figure omitted. See PDF]
The second-generation products may be different isomers formed in pathways other than shown in Scheme 1. Second-generation CHNO can be formed via CHNO, which can also be formed by the reaction of NO and O with CHO as mentioned above (Scheme S2b) or by the reaction of OH with CHNO (Scheme S2a). The time profiles of CHNO did show more contribution of second-generation processes because CHNO continuously increased with time in general. If the pathways via the reaction of NO and O with CHO and the reaction of OH with CHNO contribute most to CHNO, CHNO would show mostly a time profile of second-generation products. Similarly, second-generation CHNO can be formed via CHNO or CHNO. The time series of CHNO did show the contribution of both the first- and second-generation processes, which generally increased with time while also responding to isoprene addition (Fig. S5). Similarly to CHNO, the second-generation pathways for CHNO, CHNO, and CHNO are shown in Schemes S1, S3, and S4. For the RO in CHNO series other than CHNO, the peak of CHNO overlaps with CHNO in the mass spectra, which is a much larger peak and thus cannot be differentiated from CHNO. Therefore, it is not possible to obtain reliable separate time profiles in order to differentiate their major sources. It is worth noting that nitrate CIMS may not be able to detect all isomers of CHNO due to the sensitivity limitation. Therefore, we cannot exclude the possibility that the absence of some first-generation isomers of CHNO was due to the low sensitivity of these isomers.
Among the termination products of the 1N-monomer RO, carbonyl and hydroxyl/hydroperoxide species had comparable abundance in general (Table S1), suggesting that disproportionation reactions between RO and RO forming hydroxy and carbonyl species (R1–2) were likely an important RO termination pathway. However, dependence of the exact ratio of carbonyl species to hydroxyl/hydroperoxide species on the number of oxygen atoms did not show a clear trend (Table S1), suggesting that the reactions of HOM RO depended on their specific structure. There was no clear difference in the abundance between the termination products from CHNO with odd and even numbers of oxygen atoms in general, although the most abundant termination product of CHNO, i.e., CHNO, was likely formed from CHNO in series M1a. This fact indicates that both the peroxy pathway and alkoxy–peroxy pathway were important for the HOM formation in the isoprene NO reaction under our conditions, in agreement with the significant formation of alkoxy radicals from the reaction of RO with NO and RO.
In addition to the termination products of RO M1, minor peaks of the RO series CHNO (–9) (M4, Table 1) and their corresponding termination products including hydroperoxide, alcohol, and carbonyl species were detected (Table S3). CHNO were likely formed by sequential addition of NO and OH to two double bonds of isoprene (Scheme S5). OH can react quickly with isoprene or with the first-generation products of the reaction of isoprene with NO, thus forming CHNO. In addition, a few very minor but noticeable peaks of CHO and their corresponding termination products CHO and CHO were also observed. These HOM may be formed by the reactions of isoprene with trace amounts of OH and with O, although their contributions to reacted isoprene were negligible. These HOM were also observed in the reaction of isoprene with O with and without OH scavengers (Jokinen et al., 2015).
Among 1N-monomer HOM, CHNO has been observed in the particle phase using ESI-TOFMS by Ng et al. (2008), while others have not been observed in previous laboratory studies of the reaction of isoprene with NO, to our knowledge. A number of C organic nitrates have been observed in field studies. For example, CHNO and CHNO have been observed in the gas phase (Massoli et al., 2018) and the particle phase (Lee et al., 2016; Chen et al., 2020), respectively, in a rural area of the southeastern US, where isoprene is abundant. Xu et al. (2021) observed a number of C 1N-HOM such as CHNO in the polluted megacities of Nanjing and Shanghai of eastern China during summer. While many of these HOM have daytime sources and are attributed to photooxidation in the presence of NO, nighttime oxidation with NO also contributed to their formation (Lee et al., 2016; Chen et al., 2020; Xu et al., 2021). CHNO were also observed in chamber experiments of the reaction of isoprene with OH in the presence of NO (Lee et al., 2016). CHNO and CHNO have also been observed in the gas phase and particle phase, respectively, in a monoterpene-dominating rural area in southwestern Germany (Huang et al., 2019).
3.2.3 2N-mononmersThe 2N-monomer RO series CHNO (–14) were observed, as well as its likely termination products, CHNO and CHNO, which contain a carbonyl and hydroxyl or hydroperoxide functional group, respectively. The RO series CHNO with an odd number of oxygen atoms (, 11) (M2a in Table 1) were likely formed from the first-generation product CHNO (C5-hydroxynitrate) by adding NO to the remaining double bond, forming CHNO, followed by autoxidation (Scheme 2a). This RO series can also be formed by the addition of NO to the double bond of first-generation products (e.g., CHNO, C5-nitrooxyhydroperoxide) and a subsequent alkoxy–peroxy step (Scheme 2b). CHNO with an even number of oxygen atoms (, 10, 12) (M2b in Table 1) can be formed by the addition of NO to the double bond of CHNO followed by autoxidation (Scheme 3a) or of CHNO followed by an alkoxy–peroxy step (Scheme 3b). The formation pathways of CHNO and CHNO cannot be well explained, as they contain too many or too few oxygen atoms to be formed via the pathways in Scheme 2 or 3. In Schemes 2 and 3, we show the reactions starting from 1-NO-isoprene-4-OO as an example. In the Supplement, we have also shown the pathways starting from 1-NO-isoprene-2-OO peroxy radicals, which is indicated in a recent study by Vereecken et al. (2021) to be the dominant RO in the reaction of isoprene with NO.
Scheme 2
The example pathways to form CHNO (, 11) HOM RO series by RO channel (a) and alkoxy–peroxy channel. The detected products are in bold.
[Figure omitted. See PDF]
Scheme 3
The example pathways to form CHNO (, 12) HOM RO series by RO channel (a) and alkoxy–peroxy channel (b). The detected products are in bold.
[Figure omitted. See PDF]
Formation through either Scheme 2 or 3 means that CHNO and CHNO were second-generation products. The time series of CHNO species clearly indicates that they were indeed second-generation products. CHNO species generally did not increase immediately with isoprene addition (Fig. 3b) but increased gradually with time and reached its maximum in the later stage of each period before decreasing with time (in periods 1 and 6) or decreasing after the next isoprene addition (periods 2–5). This time profile can be explained by the time series of the precursor of CHNO, CHNO (RO) (Fig. S6). The changing rate (production rate minus destruction rate) of CHNO concentration was dictated by the concentration of CHNO and the wall loss rate. During periods 2 to 5, CHNO gradually increased but decreased sharply after the isoprene additions, resulting from chemical reactions of CHNO and additionally from wall loss. When the rate of change of the CHNO concentration was positive, the concentration of CHNO increased with time. After isoprene additions, the rate of change of the CHNO concentration decreased dramatically to even negative, leading to decreasing concentrations. Similarly to CHNO, the CHNO series did not respond immediately to isoprene additions (Fig. S7), which is expected for second-generation products according to the mechanism discussed above (Schemes 2–3). Particularly, the continuing increase in CHNO even after isoprene was completely depleted (at 21:40, Fig. S7) clearly indicates that these compounds were second-generation products, although in the end they decreased due to wall loss.
According to the finding by Ng et al. (2008), C5-hydroxynitrate decays much more quickly than C5-nitrooxyhydroperoxides. Additionally, C5-hydroxynitrate concentration is expected to be higher than that of nitrooxyhydroperoxides because forming alcohol is likely more important than forming hydroperoxide in this study. Therefore, it is likely that CHNO M2a series were mainly formed from CHNO instead of CHNO, while CHNO M2b were formed from CHNO followed by an alkoxy–peroxy step. That is, Schemes 2a and 3b appear more likely.
Similarly to CHNO, the intensity of carbonyl species from CHNO was also comparable with that of hydroxyl/hydroperoxide species, suggesting that reaction forming ketone and alcohol was likely an important pathway of HOM formation in the isoprene NO reaction. In general, the intensities of the termination products from CHNO with both even and odd oxygen numbers were comparable. This again suggests that both peroxy and alkoxy–peroxy pathways were important for HOM formation in the isoprene NO reaction. The intensity of CHNO first increased and then decreased with oxygen number, while CHNO decreased with oxygen number, with CHNO and CHNO being the most abundant within their respective series.
Some 2N-monomers have been detected in previous studies of the reaction of isoprene with NO. CHNO was detected in the particle phase by Ng et al. (2008), and CHNO was detected in the gas phase by Kwan et al. (2012). CHNO has been proposed to be formed via the pathway as in Scheme 2a (Ng et al., 2008), and it was directly detected in our study. CHNO species has been proposed as a dinitrooxy epoxide formed by the oxidation of nitrooxyhydroperoxide (Kwan et al., 2012) instead of being a dinitrooxy ketone proposed in our study, a termination product of CHNO. Admittedly, CHNO may contain both isomers. In addition, Ng et al. (2008) detected CHNO in the gas phase, which was not detected in this study, likely due to the selectivity of NO-CIMS. 2N-monomers have also been observed in previous field studies. For example, Massoli et al. (2018) observed CHNO in rural Alabama, US, during the SOAS campaign. Xu et al. (2021) observed CHNO and CHNO in the polluted megacities of Nanjing and Shanghai during summer.
One could suppose that CHNO should also be formed since C5-nitrooxycarbonyl (CHNO) also contains one double bond that can be attacked by NO in a second oxidation step. However, concentrations of CHNO were too low to assign molecular formulas with confidence except for CHNO, clearly showing that CHNO was not important. This fact is consistent with the finding by Ng et al. (2008) that C5-nitrooxycarbonyls react slowly with NO. Additionally, the peroxy radical formed in the reaction of C5-nitrooxycarbonyls with NO likely leads to more fragmentation in H shift as found in the OH oxidation of methacrolein (Crounse et al., 2012), which may also contribute to the low abundance of CHNO. The presence of HOM containing two N atoms is in line with the finding by Faxon et al. (2018), who detected products containing two N atoms in the reaction of NO with limonene, which also contain two carbon double bonds. It is anticipated that for VOC with more than one double bond, NO can add to all the double bonds as for isoprene and limonene.
3.2.4 3N-monomersHOM containing three nitrogen atoms, CHNO (–16), were observed. These compounds were possibly peroxynitrates formed by the reaction of RO (CHNO) with NO. The time series of CHNO was examined to check whether they match such a mechanism. If CHNO were formed by the reaction of CHNO with NO, the concentration would be a function of the concentrations of CHNO and NO as follows: where [CHNO], [CHNO], and [NO] are the concentrations of these species, is the rate constant, and is the wall loss rate. Because the products of CHNO and NO were at their maximum at the end of each period and decreased rapidly after isoprene addition (Fig. S8), the concentration should have its maximum increasing rate at the end of each isoprene addition period. However, we found that only CHNO showed such a time profile (Fig. S9), while CHNO generally increased with time, different from what one would expect based on the proposed pathway. Therefore, it is likely that CHNO were mainly formed via the reaction of CHNO with NO, whereas CHNO were not. Moreover, CHNO cannot be explained by the reaction CHNO () with NO or NO, because these reactions would add at least one more oxygen atom. One possible pathway to form CHNO was the direct addition of NO to the carbon double bond of C5-hydroxynitrate, forming a nitronitrate. Such a mechanism was proposed previously in the heterogeneous reaction of NO with 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) because -NO and -NO groups were detected (Lai and Finlayson-Pitts, 1991). This pathway generally matched the time series of CHNO typical of second-generation products since C5-hydroxynitrate was a first-generation product. It is possible that the main pathway of CHNO was the reaction of CHNO with NO, although the reaction of NO with double bonds in common alkenes and unsaturated alcohols is believed to be unimportant (Japar and Niki, 1975; Pfrang et al., 2006).
3N-monomer, CHNO, has been observed in the particles formed in the isoprene NO reaction by Ng et al. (2008). Here a complete series of CHNO was observed. CHNO was previously proposed to be formed by another pathway, i.e., the reaction of RO (CHNO) and NO (Ng et al., 2008). We further examined the possibility of such a pathway in our study. Similarly to NO, if CHNO were formed by the reaction of CHNO with NO, the concentration would have its maximum increasing rate at the end of each isoprene addition period. Among CHNO, the precursors of CHNO, CHNO showed a maximum increasing rate and a subsequent decrease after isoprene addition. The difference in oxygen number between CHNO, the termination products, and CHNO, the corresponding RO with the consistent time profile, is mostly two. Since the reaction of CHNO with NO and NO results in increased oxygen numbers by two and by one, respectively, we infer that it is more likely that CHNO were formed by the reaction of CHNO with NO rather than NO, and thus they were likely peroxynitrates rather than nitrates formed by the reaction of RO with NO. Since alkyl peroxynitrates decompose rapidly (Finlayson-Pitts and Pitts, 2000; Ziemann and Atkinson, 2012), it is possible that these compounds contained peroxyacylnitrates.
Little attention has been paid to the pathway in nighttime chemistry of isoprene in the literature (Wennberg et al., 2018), which is likely due to the instability of the products. According to this pathway, CHNO, which was proposed as a ketone formed via CHNO in the M2 series (Table 1) as discussed above, can also comprise peroxynitrate formed by the reaction of CHNO (M1a RO) with NO. 3N dimers such as CHNO have been observed in a recent field study in polluted cities in eastern China (Xu et al., 2021).
3.3 HOM dimers and their formation
A number of HOM dimer series were observed, including CHNO (–17), CHNO (–19), and CHNO (–18), CHNO (–16), CHNO (–17), and CHNO (–15) series (Tables 2, S3). CHNO series (dimer 1, Table 2) was likely formed by the accretion reaction of two monomer RO of M1a/b (Reaction R7).
R7 Similarly, CHNO series (dimer 2, Table 2) were likely formed by the accretion reaction of two monomer RO of M2 (Reaction R8). As and are , the number of oxygen in CHNO is expected to be . This is consistent with our observation that only CHNO with had significant concentrations. R8
Table 2HOM dimers and trimers formed in the oxidation of isoprene by NO.
Series number | Formula | Type | Pathway of RO |
---|---|---|---|
Dimer 1 | CHNO | ROOR | M1 M1 |
Dimer 2 | CHNO | ROOR | M1 M2/M3 M4 |
Dimer 3 | CHNO | ROOR | M2 M2 |
Dimer 4 | CHNO | ROOR | M1 M4 |
Dimer 5 | CHNO | ROOR | M1 M3 |
Dimer 6 | CHNO | ROOR | M2 M4 |
Dimer 7 | CHNO | ROOR | Unknown |
Dimer 8 | CHNO | ROOR | CHNO |
Dimer 9 | CHNO | ROOR | CHNO |
Dimer R1 | CHNO | RO | Dimer 1 NO |
Dimer R2 | CHNO | RO | Dimer 1 OH |
Dimer R3 | CHNO | RO | Dimer 2 NO |
Dimer R4 | CHNO | RO | M1 CH |
Trimer 1 | CHNO | ROOR | Dimer R1 M1 |
Trimer 2 | CHNO | ROOR | Dimer R3 M1; dimer R1 M2 |
Trimer 3 | CHNO | ROOR | Dimer R2 M1; dimer R4 M2 |
Trimer 4 | CHNO | ROOR | Dimer R2 M2 |
ROOR denotes organic peroxide. The numbering refers to Table 1.
CHNO series (dimer 3, Table 2) were likely formed by the cross-accretion reaction of one M1 RO and one M2 RO (Reaction R9). Since is and is , the number of oxygen atoms in CHNO is expected to be , which is also roughly consistent with our observation that only CHNO with were detected. R9 Similarly, CHNO and CHNO series (dimer 4, dimer 5, Table 2) were likely formed from the accretion reaction between one M1 RO and one M4 RO and between one M1 RO and one M3 RO (CHNO). Other dimer series than dimers 1–5 were also present. However, they had quite low intensity (Fig. 4), which was consistent with the low abundance of their parent monomer RO. They can be formed from various accretion reactions of monomer RO. For example, CHNO can be formed by the accretion reaction of CHNO and CHNO (Table 2).
Figure 4
Kendrick mass defect plot for O of HOM dimers formed in the isoprene NO reaction. The size (area) of circles is set to be proportional to the average peak intensity of each molecular formula during the first isoprene addition period (P1). The molecular formula includes the reagent ion NO, which is not shown for simplicity. The species labeled in grey (CHNO H[15N]O) are the adducts of CHNO with H[15N]O.
[Figure omitted. See PDF]
Similarly to monomers, a few species dominated in the HOM dimer spectrum. The dominant dimer series were CHNO and CHNO series, with CHNO and CHNO showing the highest intensity among each series (Fig. 4). In addition, the O C ratio or oxidation state of HOM dimers was generally lower than that of monomers (Figs. 2, 4), which resulted from the loss of two oxygen atoms in the accretion reaction of two monomer RO.
According to the mechanism above (Reactions R7–R9), we attempt to explain the relative intensities of the dimers using the signal intensities of monomer RO. Assuming that the rate constant for each of the HOM-RO HOM-RO reactions forming dimers is the same considering that all HOM-RO are highly oxygenated with a number of functional groups, it is expected that the dimer formed by the recombination between the most abundant RO has the highest intensity. The most abundant monomers RO were CHNO and CHNO, and thus the most abundant dimers are expected to be CHNO, CHNO, and CHNO. This expected result is in contrast with our observation showing that the most abundant dimers were CHNO and CHNO (Fig. 4). The discrepancy is possibly attributed to the presence of less oxygenated RO (with O 5) that have a low detection sensitivity in the NO-CIMS (Riva et al., 2019) due to their lower oxygenation compared with other HOM RO shown above. These RO may react with CHNO and CHNO. For example, CHNO (RO) is proposed as an important first-generation RO in the oxidation of isoprene by NO (Ng et al., 2008; Rollins et al., 2009; Kwan et al., 2012; Schwantes et al., 2015). Although CHNO showed a very low signal in our mass spectra, it was likely to have high abundance since it was the first RO formed in the reaction of isoprene with NO. Indeed, we found that the termination products of CHNO such as CHNO, CHNO, and CHNO had high abundance in another study, indicating the high abundance of CHNO. The accretion reaction of CHNO with CHNO and CHNO can explain the high abundance of CHNO and CHNO among all dimers.
Provided that CHNO is abundant, we still cannot explain the relative intensities of CHNO, CHNO, and CHNO that were all formed by the accretion reaction with CHNO. CHNO should have the highest intensity among CHNO as its precursor RO, CHNO, is the most abundant. This suggests that accretion reactions other than those of CHNO with CHNO also contributed to CHNO. Admittedly, the assumption of different RO having similar rate constants in accretion reactions may not be valid. For example, self-reaction of tertiary RO is slower than secondary and primary RO (Jenkin et al., 1998; Finlayson-Pitts and Pitts, 2000). Different rate constants may also lead to the observation that the most abundant dimers could not be explained by the most abundant RO.
The time profiles of CHNO indicate contributions of both the first- and second-generation products. The dominance of the first- or second-generation products depended on the specific compounds. Most CHNO compounds increased instantaneously after isoprene additions, indicating significant contributions of first-generation products. Since the formation of CHNO likely involved CHNO as discussed above, the instantaneous increase may result from the increase in CHNO as well as other first-generation RO. After the initial increase, CHNO then decayed with time (Fig. 5), while CHNO increased again in the later phase of a period and when NO and O were added. The second increase indicated that CHNO may contain more than one isomer, which had different production pathways. As discussed above, CHNO can be either a first-generation RO formed directly via the reaction of isoprene with NO and autoxidation or a second-generation RO, e.g., formed via the reaction of CHO with NO. Therefore, the second increase in CHNO may result from the reaction of two first-generation RO and of two second-generation RO or between one first-generation and one second-generation RO. The increase in CHNO after isoprene addition was not large, indicating the larger contributions from second-generation products compared with other CHNO. Overall, as the number of oxygen increased, the contribution of second-generation products to CHNO increased.
Figure 5
Time series of peak intensity of several HOM dimers of CHNO series. The dashed lines indicate the time of isoprene additions. The long-dashed arrow indicates the time of NO addition. The dash-dotted arrows indicate the time of O additions. The horizontal arrows indicate -axis scales for different markers.
[Figure omitted. See PDF]
In contrast to CHNO series, CHNO increased gradually after each isoprene addition and then decreased afterward (Fig. 6), either naturally or after isoprene additions, which is typical for second-generation products. Since CHNO was likely formed by the accretion reaction of CHNO (RO), the time profile of CHNO was as expected since CHNO was formed via the reaction of NO with first-generation products CHNO. The CHNO concentration depended on the product of the concentrations of two CHNO. Taking CHNO as an example, its concentration can be expressed as follows: When the concentration of CHNO increased, the changing rate of CHNO was positive and increased, and thus the concentration of CHNO increased. When the concentration CHNO decreased sharply after isoprene additions, the changing rate of CHNO decreased and even became negative values, and thus the concentration of CHNO decreased after isoprene addition.
Figure 6
Time series of peak intensity of several HOM dimers of CHNO series. The dashed lines indicate the time of isoprene additions. The long-dashed arrow indicates the time of NO addition. The dash-dotted arrows indicate the time of O additions. The horizontal arrows indicate -axis scales for different markers.
[Figure omitted. See PDF]
Similarly to the CHNO series, while CHNO first increased instantaneously with isoprene addition, it increased again during the later stage of each period (Fig. S10), showing a mixed behavior of the first-generation products and second-generation products. The time series of CHNO was as expected in general because CHNO was likely formed via the accretion reaction of CHNO (M1 RO) and CHNO (M2 RO), which were first- or second-generation, and second-generation RO, respectively.
Some dimers that cannot be explained by accretion reactions, such as CHNO, CHNO, CHNO, CHNO, and CHNO, were also observed. These dimers had low abundance. We note that due to their low signals in the mass spectra, their assignment and thus range of may be subject to uncertainties. Since CHNO, CHNO, and CHNO contain unpaired electrons, they cannot be formed via the direct accretion reaction of two RO. Instead, CHNO (dimer R1) and CHNO (dimer R2) were likely RO formed by the reaction of HOM dimers containing a double bond (dimer 1) with NO and with OH, respectively, followed by the reaction with O. The corresponding termination products of CHNO RO series such as CHNO (ketone) and CHNO (hydroperoxide/alcohol) were also observed, although these compounds can also be formed via reactions between two RO radicals (Reaction R9 and Table 1). Among the termination products, CHNO had low intensity. Reaction (R13) and the termination reaction of CHNO with HO provided an additional pathway to CHNO besides the Reaction (R9) pathway discussed above. Similarly, other dimers may also be formed by the termination reactions of dimer RO with RO or HO. For example, CHNO can be formed via termination reaction of CHNO with another RO wherein CHNO can be formed as follows. R12 CHNO could be explained by the reaction of monomer RO with isoprene. R13 Only CHNO with were detected, while according to the mechanism of self-reaction between CHNO, the range of CHNO is expected to be 7–14. The absence of CHNO is likely attributed to their low abundance, which might result from low precursor concentrations, low reaction rates with isoprene, and/or faster reactive losses with other radicals. Such a reaction of RO with isoprene has been proposed by Ng et al. (2008) and Kwan et al. (2012). The corresponding termination products of CHNO are CHNO (ketone) and CHNO species (hydroperoxide/alcohol). CHNO species showed a time profile of typical first-generation products (Fig. S11), i.e., increasing immediately with isoprene addition and then decaying with time. This behavior further supports the possibility of Reaction (R13). Yet the reaction rate of alkene with RO is likely low due to the high activation energy (Stark, 1997, 2000). It is worth noting that to our knowledge no experimental kinetic data on the addition of RO to alkenes in the gas phase in atmospheric relevant conditions are available, though fast, low-barrier ring closure reactions in unsaturated RO radicals have been reported (Vereecken and Peeters, 2004, 2012; Kaminski et al., 2017; Richters et al., 2017; Chen et al., 2021). We would like to note that there is unlikely interference to C-HOM from monoterpenes, which has been reported previously (Bernhammer et al., 2018), as the concentration of monoterpenes in the chamber during this study was below the limit of detection, which was ppt (3).
Some of the dimers discussed above have been observed in previous laboratory studies. Ng et al. (2008) found CHNO and CHNO in the gas phase and CHNO, CHNO, CHNO, and CHNO in the particle phase. CHNO and CHNO were also observed in our study, but their intensity in the MS was too low to assign molecular formulas with high confidence. The low intensity may be due to the low sensitivity of CHNO in NO-CIMS. According to modeling results of the products formed in cyclohexene ozonolysis by Hyttinen et al. (2015), at least two hydrogen bond donor functional groups are needed for a compound to be detected in a nitrate CIMS. As CHNO and CHNO have no and only one H-bond donor function groups, respectively, they are expected to have low sensitivity in NO-CIMS. Moreover, the low intensity can be partly attributed to the much lower isoprene concentrations used in this study compared to previous studies, leading to the low concentration of CHNO and CHNO (Ng et al., 2008). CHNO, CHNO, CHNO, and CHNO were all observed in the gas phase in this study, wherein the concentration of CHNO was very low. The formation pathways of CHNO, CHNO, and CHNO (Reaction R8) were generally similar to those proposed by Ng et al. (2008), except that the products from H shift of RO were involved in the formation of CHNO. Among the two pathways of CHNO formation (Reaction R8 and via Reaction R12), our results indicate that Reaction (R8) was the main pathway, based on the low concentrations of CHNO and other termination products of them, CHNO. That the time profile of CHNO was consistent with what is expected from Reaction (R8) as discussed above offers additional evidence for that conclusion.
Few field studies have reported HOM dimers formed via the reaction of NO with isoprene. This might be because NO isoprene-HOM dimers can have the identical molecular formula to the HOM monomers from monoterpene oxidation. Possible contribution of dimer formation in the isoprene oxidation to C6–10 HOM in the particle phase observed at a rural site, Yorkville, US, is reported by Chen et al. (2020), although these HOM are thought to be more likely from monoterpene oxidation.
3.4 HOM trimers and their formationA series of HOM trimers were observed, such as CHNO, CHNO, CHNO, CHNO, and CHNO. Among the trimers, CHNO was the most abundant series (Fig. S12). The CHNO series can be explained by the accretion reaction of one monomer HOM RO and one dimer HOM RO.
R14 The formation pathways of dimer RO CHNO (–15) and CHNO are shown above (Reactions R10 and R11).
The other trimers were likely formed via similar pathways (Table 2 and Supplement Sect. S2). Since NO-CIMS cannot provide the structural information of these HOM trimers, we cannot elucidate the major pathways. However, in all these pathways, dimer-RO is necessary to form a trimer, and most of the dimer-RO formation pathways require at least one double bond in the dimer molecule except for the reaction of RO with isoprene. Since one double bond has already reacted in the monomer-RO formation, we anticipate that in the reaction with NO it will be more favorable for precursors (VOC) containing more than one double bond to form trimer molecules than precursors containing only one double bond, as it is easier to generate new RO radicals from these dimers by attack on the remaining double bond(s).
The time profile of CHNO showed the mixed behavior of first- and second-generation products (Fig. S13), consistent with the mechanism discussed above since CHNO and CHNO were of first- or second-generation and second-generation, respectively. The contributions of the second-generation products became larger as the number of oxygen atoms increased. In contrast, CHNO showed instantaneous increase with isoprene addition (Fig. S14), which was typical for time profiles of first-generation products. Both proposed formation pathways of CHNO (Reactions RS6 and RS7) contained a second-generation RO, which was not in line with the time profile observed. The observation cannot be well explained unless we assume molecular adducts of a dimer with one monomer. It is also possible that some CHNO were formed very, very quickly or that there were other formation pathways of CHNO not accounted for here.
We are not aware of field studies reporting NO isoprene-HOM trimers, which is likely for the same reason for dimers discussed above. It is challenging to distinguish HOM trimers formed in the reaction NO with isoprene from the dimers formed by cross-reaction of the RO from monoterpene oxidation (C10-RO) with that from isoprene oxidation (C5-RO), as their molecular formulas can be identical.
3.5 Contributions of monomers, dimers, and trimers to HOMThe concentration (represented by peak intensity) of monomers was higher than that of dimers, but overall their concentrations remained on the same order of magnitude (Fig. 1a, inset). The concentration of trimers was much lower than that of monomers and dimers. The relative contributions of monomers, dimers, and trimers evolved in time due to the changing concentration of each HOM species. Comparing the contributions of various classes of HOM in period 1 with those in periods 1–6 reveals that the relative contribution of monomers increased with time, especially that of 2N-monomers, while the contribution of dimers decreased. This trend is attributed to the larger wall loss of dimers compared to monomers because of their lower volatility and also to the continuous formation of second-generation monomers, mostly 2N-monomers. Overall, the relative contribution of total HOM monomers decreased immediately after isoprene addition, while the contribution of HOM dimers increased rapidly (Fig. S15), which was attributed to the faster increase in dimer intensity due to their rapid formation. Afterwards, the contribution of monomers to total HOM gradually increased and that of dimers decreased, which was partly due to the faster wall loss rate of dimers and to the continuous formation of second-generation monomers.
3.6 Yield of HOM
The HOM yield in the oxidation of isoprene by NO was estimated using the sensitivity of HSO. It was derived for the first isoprene addition period to minimize the contribution of multi-generation products and to better compare with the data in the literature, thus denoted as primary HOM yield (Pullinen et al., 2020), and was estimated to be 1.2 %. The uncertainty was estimated as shown in Supplement Sect. S1. Despite the uncertainty, the primary HOM yield here was much higher than the HOM yield from the ozonolysis and photooxidation of isoprene (Jokinen et al., 2015). The difference may be attributed to the more efficient oxygenation in the addition of NO to carbon double bonds. Compared with the reaction with O or OH, the initial peroxy radicals contain five oxygen atoms when isoprene reacts with NO, while the initial peroxy radicals contain only three oxygen atoms when reacting with OH, and the ozonide contains three oxygen atoms in the case of O
4 Conclusion and implications
HOM formation in the reaction of isoprene with NO was investigated in the SAPHIR chamber. A number of HOM monomers, dimers, and trimers containing one to five nitrogen atoms were detected, and their time-dependent concentration profiles were tracked throughout the experiment. Some formation mechanisms for various HOM were proposed according to the molecular formula identified and the available literature. HOM showed a variety of time profiles with multiple isoprene additions during the reaction. First-generation HOM increased instantaneously after isoprene addition and then decreased, while second-generation HOM increased gradually and then decreased with time, reaching a maximum concentration at the later stage of each period. The time profiles provide additional constraints on their formation mechanism besides the molecular formula, suggesting whether they were first-generation products or second-generation products or a combination of both. 1N-monomers (mostly C) were likely formed by NO addition to a double bond of isoprene, forming monomer RO, followed by autoxidation and termination via the reaction with HO, RO, and NO. Time series suggest that some 1N-monomer could also be formed by the reaction of first-generation products with NO and thus be of second generation. 2N-monomers were likely formed via the reaction of first-generation products such as C5-hydroxynitrate with NO and are thus second-generation products. 3N-monomers likely comprised peroxy/peroxyacyl nitrates formed by the reaction of 2N-monomer RO with NO and possibly nitronitrates formed via the direct addition of NO to the first-generation products. HOM dimers were mostly formed by the accretion reactions between various HOM monomers RO, either first-generation or second-generation or with the contributions of both, and thus showed time profiles typical of either first-generation products, second-generation products, or a combination of both. Additionally, some dimer peroxy radicals (dimer RO) were formed by the reaction of NO with dimers containing a double bond. HOM trimers were proposed to be formed by accretion reactions between the monomer RO and dimer RO.
Overall, both HOM monomers and dimers contribute significantly to total HOM, while trimers only contributed a minor fraction. Within both the monomer and dimer compounds, a limited set of compounds dominated the abundance, such as CHNO, CHNO, CHNO, and CHNO series. 2N-monomers, which were second-generation products, dominated in monomers and accounted for % of all HOM, indicating the important role of second-generation oxidation in HOM formation in the isoprene NO reaction. Both RO autoxidation and “alkoxy–peroxy” pathways were found to be important for 1N- and 2N-HOM formation. In total, the yield of HOM monomers, dimers, and trimers accounted for 1.2 % of the isoprene reacted, which was much higher than the HOM yield in the oxidation of isoprene by OH and O reported in the literature (Jokinen et al., 2015). This means that the reaction of isoprene with NO is a competitive pathway of HOM formation from isoprene.
The HOM in the reaction of isoprene with NO may account for a significant fraction of SOA. If all the HOM condense on particles, using the molecular weight of the HOM with the least molecular weight observed in this study (CHNO), the HOM yield corresponds to a SOA yield of 3.6 %. Although SOA concentrations were not measured in this study, Ng et al. (2008) reported a SOA yield of the isoprene NO reaction of 4.3 %–23.8 %. Rollins et al. (2009) reported a SOA yield of 2 % at low organic aerosol loading ( g m) and 14 % if the further oxidation of the first-generation products is considered in the isoprene NO reaction. Comparing the potential SOA yield produced by HOM with SOA yields in the literature suggests that HOM may play an important role in the SOA formation in the isoprene NO reaction.
The RO lifetime is approximately 20–50 s in our experiments, which is generally comparable to or shorter than the lifetime of RO in the ambient atmosphere at night, varying from several tens to several hundreds of seconds (Fry et al., 2018), depending on the NO, HO, and RO concentrations. Assuming a HO, RO, and NO concentration of 5 ppt, 5 ppt (Tan et al., 2019), and 300 ppt (Brown and Stutz, 2012), respectively, the RO lifetime in our study is comparable to the nighttime RO lifetime (50 s) found in urban locations and areas influenced by urban plume. In areas with longer RO lifetime such as remote areas, the autoxidation is expected to be more important relative to bimolecular reactions. This may enhance HOM yield and thus enhance SOA yield. However, on the other hand, at lower RO concentration and thus longer RO lifetime, reduced rates of reactions producing low-volatility dimers can reduce the SOA yield by reducing dimer yield (McFiggans et al., 2019; Pullinen et al., 2020). The RO fate in our experiments is dominated the reaction with significant contribution of , which can also represent the RO fate in the urban areas and areas influenced by urban plume. Our experiment condition cannot represent the chemistry in HO-dominated regions such as clean forest environments (Schwantes et al., 2015).
We observed the second-generation products formed by the reaction of first-generation products. The lifetime of first-generation nitrates in the ambient atmosphere, according their rate constants with OH and NO (Wennberg et al., 2018), are and –4 h, respectively, with respect to the reaction with OH and NO assuming a typical OH concentration of 2 10 molec. cm (Lu et al., 2014; Tan et al., 2019) and a NO concentration of 100–300 ppt in urban areas (Brown and Stutz, 2012). Therefore, they have the chance to react further with OH and NO at dawn. In our experiments, the lifetimes of these first-generation nitrates with respect to OH and NO are comparable to the aforementioned lifetime due to comparable OH and NO concentrations with these ambient conditions. Therefore, our findings on the second-generation products are relevant to the ambient urban atmosphere and areas influenced by urban plumes. Some of these products such as CHNO and multi-generation nitrooxyorganosulfates have been observed in recent field studies in polluted megacities in eastern China (Hamilton et al., 2021; Xu et al., 2021).
Data availability
All the data in the figures of this study are available upon request to the corresponding author ([email protected] or [email protected]).
The supplement related to this article is available online at:
Author contributions
TFM, HF, StS, DZ, IP, AW, and AKS designed the experiments. Instrument deployment and operation were carried out by IP, HF, StS, IHA, RT, FR, DZ, and RW. Data analysis was done by DZ, HF, StS, RW, IHA, RT, FR, YG, SK, DZ, TFM, RW, JW, and SK, and LV interpreted the compiled data set. DZ and TFM wrote the paper. All the co-authors discussed the results and commented on the paper.
Competing interests
The authors declare that they have no conflict of interest.
Special issue statement
This article is part of the special issue “Simulation chambers as tools in atmospheric research (AMT/ACP/GMD inter-journal SI)”. It is not associated with a conference.
Acknowledgements
We thank the SAPHIR team for supporting our measurements and providing helpful data. Defeng Zhao and Yindong Guo would like to thank the National Natural Science Foundation of China (41875145). We would like to thank three anonymous reviewers and Kristian Møller for their helpful comments.
Financial support
This research has been supported by the National Natural Science Foundation of China (grant no. 41875145).The article processing charges for this open-access publication were covered by the Forschungszentrum Jülich.
Review statement
This paper was edited by Nga Lee Ng and reviewed by three anonymous referees.
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Abstract
Highly oxygenated organic molecules (HOM) are found to play an important role in the formation and growth of secondary organic aerosol (SOA). SOA is an important type of aerosol with significant impact on air quality and climate. Compared with the oxidation of volatile organic compounds by ozone (O
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1 Department of Atmospheric and Oceanic Sciences & Institute of Atmospheric Sciences, Fudan University, Shanghai, 200438, China; Institute of Energy and Climate Research, IEK-8: Troposphere, Forschungszentrum Jülich, 52425 Jülich, Germany; Big Data Institute for Carbon Emission and Environmental Pollution, Fudan University, Shanghai, 200438, China; Institute of Eco-Chongming (IEC), 20 Cuiniao Rd., Chenjia Zhen, Chongming, Shanghai, 202162, China
2 Institute of Energy and Climate Research, IEK-8: Troposphere, Forschungszentrum Jülich, 52425 Jülich, Germany; now at: Department of Applied Physics, University of Eastern Finland, Kuopio, 7021, Finland
3 Institute of Energy and Climate Research, IEK-8: Troposphere, Forschungszentrum Jülich, 52425 Jülich, Germany
4 Institute of Energy and Climate Research, IEK-8: Troposphere, Forschungszentrum Jülich, 52425 Jülich, Germany; now at: Institute of Nutrition and Food Sciences, University of Bonn, 53115 Bonn, Germany
5 Department of Atmospheric and Oceanic Sciences & Institute of Atmospheric Sciences, Fudan University, Shanghai, 200438, China