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1. Introduction
Collagen fibers and their structure are responsible for the distinctive mechanical response of many soft biological tissues such as skin, tendons, cartilages, myocardium, or arteries [1]. Similarly, the observed differences in mechanical behavior (flexibility and strength) between healthy and pathological arteries (e.g., abdominal aortic aneurysm) are largely related to changes in collagen organization [2–6]. Consequently, knowledge of collagen structure in soft tissues is crucial for a deeper understanding of their mechanical behavior and for their structure-based constitutive description [7] which is decisive for clinical applications of computational models. For instance, computational modeling offers the best assessment of the rupture risk of aortic aneurysm or atherosclerotic plaque [4, 8–10] and promises exploitation in timing of surgeries.
There are several approaches how to visualize collagen fibers in soft tissues but each has some limitations. For example, the small-angle X-ray scattering (SAXS) [11] suffers from disadvantages such as degradation of organic fibers, complexity of optical elements, and need for safety precautions to prevent inadvertent irradiation. Another frequently used method, small-angle light scattering (SALS) [12], is precise but also highly time-consuming. Fluorescence microscopy-based methods, such as confocal laser scanning microscopy (CLSM) [13, 14] or multiphoton microscopy (MM) [15], are precise and fast but require expensive microscopic equipment and mostly a complex sample staining with combination of adhesion protein (CNA35) and a special fluorescent dye (OG488) [13, 14, 16]. Noncentrosymmetric crystalline triple helix structure of collagen allows to emit second harmonic generation (SHG) light used in multiphoton or confocal microscopy [17]. Tanaka et al. used polarization-resolved SHG microscopy to show the orientation of collagen in human facial skin in vivo [18]. This method has proven to be particularly suitable for the observation and analysis of collagen orientation in relatively simple tissues, e.g., in the skin or tendon but is not very suitable for more complex tissues (vessel wall) [18]. Although quantitative polarized light microscopy (QPLM) [19–21] can be more effective here, it requires a sophisticated and rather expensive equipment: a modified confocal microscope with quarter-wave plate and rotating analyzer. While the above studies demonstrated the ability of QPLM to determine the orientation of collagen, they did not address the dispersion of fibers and its subsequent use in constitutive models. For this purpose, fast Fourier transform is often applied [22–24] despite of its drawback increasing its time demands: it evaluates the dominant fiber directions correctly [22] but requires calibration by ground truth data to correctly capture the dispersion of fiber directions [23].
In contrast, classical polarized light microscopy (PLM) is a simple and widely used optical method preferred in analyses of collagen structure because it allows evaluation over a large sample area and does not require any expensive equipment or complex sample preparation [4, 22, 25–27]. It is based on two mutually perpendicular (crossed) polarizers that transmit only a portion of the polarized light scattered by a birefringent specimen. Nevertheless, this method has two limitations: first, in case of manual evaluation, it is very slow and sensitive to operator’s experience and concentration when following the chosen fiber till its extinction during specimen rotation. Its inaccuracy and operator’s dependence were documented by Novak et al. [28]. Consequently, a typical number of manually evaluated points (volume elements) per image is of the order of tens [4, 22, 27] which is not sufficient to extract rigorous information regarding dispersion of collagen fibers. Second, two mutually perpendicular structures cannot be distinguished from each other due to its intrinsic 90° uncertainty originating from the periodic nature of the pixel angular intensity profile (i.e., dependence of pixel intensity on the sample rotation).
In this paper, we present a new method for semiautomatic evaluation of the orientation and dispersion of collagen fibers using PLM within all the 180° range without any additional components. Although this limitation has already been overcome by addition of a universal compensator (two variable retarders) in front of the sample [29–33], or a quarter-wave plate behind it [34, 35] in the light path of the polarizing microscope, the presented algorithm is applicable with any polarized light microscope even if this additional equipment cannot be used. We have found another way how to overcome the angular limitation given by the periodicity of light intensity at crossed filters and proposed an automatic algorithm that is capable to evaluate the orientation in each pixel of the micrograph. The obtained histograms, transformed into mean angles of fibers and parameters of their concentration (dispersion), serve as inputs to structural constitutive models of the tissues in computational modeling, e.g., of healthy and pathological states of blood vessels.
2. Materials and Methods
In manual PLM with crossed polarizers, the specimen orientation with zero intensity (extinction) is seeked for, while in automated approach, the intensity values measured under different specimen rotations are approximated with a sine function with π/2 periodicity to find the angle of minimal intensity [26]. To overcome this intrinsic limitation, we need to double this periodicity.
2.1. Procedure Description and the Proposed Automated Algorithm
The standard PLM setting with cross-polarized filters, i.e., with perpendicular orientation of polarizer 1 and polarizer 2 (called analyzer below) is shown in Figure 1(a). Consequently, no light can pass through both polarizers, unless its polarization state is changed by a birefringent (optically anisotropic) material located in the light trajectory between both polarizers. The birefringent material rotates the plane of polarized light towards its major axis of anisotropy so that this plane is no longer perpendicular to the analyzer, and some portion of the light can pass through. The intensity of the transmitted light depends on its polarization and is maximal (or minimal) for the light polarized in two mutually perpendicular directions [36]. Zero intensity (fiber extinction) occurs when the fiber is oriented in parallel with either the polarizer or the analyzer, and the intensity of the passing light is maximal for the fiber angle of 45° with respect to both polarizers.
[figures omitted; refer to PDF]
Another important feature of collagen is its diattenuation, a total anisotropic attenuation of light caused by absorption and scattering. To choose most convenient parameters of the setting, the diattenuation was measured for different light wavelengths (see Figure 1(b)) using a fiber optic spectrometer StellarNet BW-VIS2 (with 600 μm aperture of optical fiber); the signal originated from a small circular area (30 μm in diameter) in the center of a specimen of collagen tissue. The proposed method exploits combination of these two effects to switch the angular periodicity of the transmitted light from 90° to 180° for nonperpendicular polarizers. This is illustrated with images of porcine tendon in Figure 1(c) where differences of intensity between the neighboring maxima are visible for the rotated analyzer (
In contrast to manual measurements, the automated algorithms record the polarized light intensities under different rotations of the specimen and subsequently fit the measured data with a theoretical intensity curve. The proposed algorithm builds on our approach reported in [28] which exploited a well-known phase-correlation and 90° cosine-like periodicity of the polarized light intensity under 2D (in-plane) rotation of the specimen. Within this approach, three rotated images were needed to fit the position of the purely cosine-like normalized intensity curve which, however, cannot suffice here due to nonsinusoidal character of the periodic function.
Before measuring, we calibrated both polarizers and set the coaxiality of the axis of specimen rotation with the optical axis. In the first step, we recorded a set of 18 images rotated per 10° with cross-polarized setting (i.e.,
[figures omitted; refer to PDF]
The minima in the cosine-like function represent the angles, at which the fiber in the investigated pixel is oriented along the polarization axis of either the polarizer or the analyzer. As one cannot distinguish between these two perpendicular orientations, this ambiguity is resolved by setting
The first term (~
Therefore, the second step of our algorithm consists of recording another set of 18 images with rotated polarizers (
Examples of the intensity curves, both measured and calculated (using eq. (2)), are presented in Figures 2(a) and 2(b). Slight deviations of the measured curves from the periodical theoretical dependences are caused likely by the fact that we rotate the sample and, despite our best efforts devoted to calibration, the spot from which these particular spectra were taken does not coincide exactly with the rotation axis of our sample stage. However, as these discrepancies concern only amplitude and not the phase of the
This map shows that for
Note that for specimens possessing only a weak anisotropy, the background birefringence can play an important role and one should compensate for it in the data analysis using, for example, a procedure analogous to that outlined in [29].
2.2. Preparation of Samples
The proposed method was validated using porcine Achilles tendon and porcine aortic wall. Specimens were harvested in a local slaughterhouse from 10 months old pigs weighing 105-120 kg. The preparation of histological sections was done in St. Anne’s University Hospital in Brno.
Achilles tendon consists of unidirectionally oriented collagen fibers being prone to undulation if an unloaded tendon is used to harvest the specimen. Cuboid specimens of approx.
Aortic specimens with dimensions
2.3. Experimental Setup
All the histological slices were scanned with an upright microscope (Padim, Drexx s.r.o., CZ) in a transmission configuration equipped with a digital camera (Bresser microcam 5 megapixel, Bresser GmbH, Germany) and standard 2D rotary stage (Padim, Drexx s.r.o., CZ). All the images were recorded under identical illumination conditions and magnification (10× objective, numerical aperture 0.17; 10× ocular, exposure time 500 ms); the trimmed images had the size of
3. Results
3.1. Verification of the Algorithm
As the functionality of the original algorithm with
[figures omitted; refer to PDF]
3.2. Validation of the Algorithm
Figure 4 shows the validation results, i.e., comparison between the automated algorithm and manual measurements. The results of the manual measurement, with some 300 square-shaped evaluated areas (each of approx.
[figure omitted; refer to PDF]
Although in all the compared variants the mean angle is evaluated correctly, there are significant differences in the other parameters of the distribution. While the first three micrographs are almost identical in all parameters, the last histogram (based on 3 images only) suffers from a lower percentage of evaluated pixels, a significant number of erroneously evaluated angles (rotated by 90°), and consequently a different concentration parameter
Finally, to check the suitability of the algorithm for tissues with a more complex collagen arrangement, we performed the same comparison for the media of porcine aortic wall. The evaluated sections are in the circumferential-axial plane with dispersion and waviness being much higher than in radial direction and thus more difficult for evaluation [13, 41]. Here, only some half of the pixels was evaluated, matching the percentage of collagen in this layer [42]. The histograms in Figure 6 confirm that the mean angle and concentration parameter of the distribution were evaluated correctly and accurately in all cases. We can conclude that 6 rotated micrographs are sufficient for the evaluation of comparable tissues to avoid the reduction in the number of evaluated pixels or incorrect evaluation of their directions.
[figure omitted; refer to PDF]4. Discussion
In this paper, we have proposed a new semiautomated method for evaluation of the orientation and dispersion of collagen fibers in soft tissues. It requires ca two minutes to record manually the needed 12 pictures of one micrograph and then it takes a few seconds to evaluate the orientation in up to 5·105 pixels. The presented method overcomes two major limitations of PLM: time-consuming manual evaluation and the
To prove the correctness of the algorithm, it was verified using several manually evaluated pixels in micrographs of porcine Achilles tendon with mostly unidirectional and straight fibers. The subsequent validation against manual measurements with the same specimens demonstrated benefits and efficiency of the proposed technique. In the manual evaluation, we could not evaluate more than some 300 areas per microscopic image, while the algorithm determined the fiber orientation in each pixel, i.e., some 4.5·105 values in the same image. The much higher
In contrast to QPLM [20, 21], CLSM [13, 14], or MM [15], the proposed method does not require any additional equipment such as quarter-wave plates [34, 35] and compensators [29–33] which may be difficult or even impossible to be supplemented into some of the microscopes as it was in our case; it is based on light microscopy and requires only two polarizers and a standard rotary table. Thus, the proposed method appears promising thanks to its broad applicability even with the simplest polarized light microscopes.
Some limitations remain, of course, mostly due to the basic principles of light microscopy. The thickness of specimens must be lower than 10 μm, thus, their cutting with microtome may damage some structural components or tear fibers, especially if their out-of-plane dispersion or waviness are significant. The applied 5 μm thin slices are also very compliant, and their position on the glass substrate may be distorted and thus vary locally. In comparison with these variations, the inaccuracies caused by manual settings of the angles of polarizers and specimens are much lower (<1°). Also, we neglect the strains caused by unfolding of the rounded aortic specimens. Other errors could be introduced through misalignment of the polarizers or inaccurate positioning of the sample. A careful manipulation, however, may reduce these errors to a level insignificant in comparison with fiber dispersion and tissue variability. Despite these sources of errors, our procedure evaluated correctly the orientation of fibers, proving its robustness and effectivity. Naturally, errors related to extreme nonhomogeneity of the tissue, such as reported by Jett et al. [45], cannot be eliminated and must be treated by subdivision of the specimens.
The objective of the proposed method, similarly to most of the others, is to obtain histograms of fiber directions. For their following transformation into structural parameters of the constitutive models, we have shown here only approximation with unimodal von Mises distribution function. Naturally, for 3D distributions or for multimodal distributions (with more fiber families), more complex distribution functions have to be applied. However, it is not quite easy to distinguish between fiber waviness and dispersion, and misinterpretations of wavy fibers as two fiber families may occur [28]. Thus, completely different approaches should be adopted to obtain also parameters representing fiber waviness [15] that appear in some constitutive models (for instance [46]). These approaches may be based on histological investigation of the tissue under load, when the fibers are more or less straightened [5, 6, 44, 45]; this issue is, however, out of scope of this paper. Transformation of histograms into structural parameters of constitutive models is addressed in greater detail in another paper being just prepared.
In the context of our experiments, a higher resolution of the camera was not needed, since we do not study collagen fibers at the molecular level, and the large view-field allowed us to quickly evaluate the examined area of the sample. Nevertheless, it is possible to easily enlarge the studied area using special objectives or a larger camera chip. Conversely, for applications in which high resolution is important, one can choose an objective with a high numerical aperture and magnification.
5. Conclusion
We demonstrated a new method for semiautomatic, fast, and accurate evaluation of orientation and dispersion of collagen fibers in soft tissues using polarized light microscopy. Our method is based on two sets of six rotated micrographs obtained with both perpendicular and rotated polarizers. The mutual rotation of both polarizers overcomes the
Disclosure
A preprint has previously been published [47].
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Abstract
A novel method for semiautomated assessment of directions of collagen fibers in soft tissues using histological image analysis is presented. It is based on multiple rotated images obtained via polarized light microscopy without any additional components, i.e., with just two polarizers being either perpendicular or nonperpendicular (rotated). This arrangement breaks the limitation of 90° periodicity of polarized light intensity and evaluates the in-plane fiber orientation over the whole 180° range accurately and quickly. After having verified the method, we used histological specimens of porcine Achilles tendon and aorta to validate the proposed algorithm and to lower the number of rotated images needed for evaluation. Our algorithm is capable to analyze 5·105 pixels in one micrograph in a few seconds and is thus a powerful and cheap tool promising a broad application in detection of collagen fiber distribution in soft tissues.
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1 Brno University of Technology, Faculty of Mechanical Engineering, Institute of Solid Mechanics, Mechatronics and Biomechanics, Technická 2896/2, Brno 616 69, Czech Republic
2 Brno University of Technology, Faculty of Mechanical Engineering, Institute of Physical Engineering, Technická 2896/2, Brno 616 69, Czech Republic
3 1st Department of Pathology, St. Anne’s University Hospital Brno and Faculty of Medicine, Masaryk University, Pekařská 664/53, 656 91 Brno, Czech Republic; Department of Anatomy, Faculty of Medicine, Masaryk University, Kamenice 126/3, Brno, 625 00, Czech Republic
4 1st Department of Pathology, St. Anne’s University Hospital Brno and Faculty of Medicine, Masaryk University, Pekařská 664/53, 656 91 Brno, Czech Republic
5 Technical University Ostrava, Faculty of Mechanical Engineering, Department of Applied Mechanics, 17 Listopadu 15, Ostrava 708 33, Czech Republic