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Abstract
Enterococcus faecalis is associated with streptococcosis like infection in fish. A whole-genome sequence study was conducted to investigate the virulence factor and antibiotic-resistance genes in three fish pathogenic E. faecalis. Genomic DNA was extracted from three strains of E. faecalis isolated from streptococcosis infected Nile tilapia (strains BF1B1 and BFFF11) and Thai sarpunti (strain BFPS6). The whole genome sequences of these three strains were performed using a MiSeq sequencer (Illumina, Inc.). All three strains conserved 69 virulence factor such as genes associated with protection against oxidative stress, bacterial cell wall synthesis, gelatinase toxin, multiple biofilm-associated genes and capsule producing genes. Moreover, 39 antibiotic-resistance genes against sixteen major groups of antibiotics were identified in the genome sequences of all three strains. The most commonly used antibiotic Tetracycline resistance genes were found only in BFPS6 strain, whereas, Bacteriocin synthesis genes were identified in both BFFF11 and BFPS6 strain. Phylogenetic analysis revealed that strains BF1B1 and BFFF1 form a different cluster than BFPS6. This is one of the first whole-genome sequence study of fish pathogenic E. faecalis, unfold new information on the virulence factor and Antibiotic resistance genes linked to pathogenicity in fish.
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1 Bangabandhu Sheikh Mujibur Rahman Agricultural University, Institute of Biotechnology and Genetic Engineering, Gazipur, Bangladesh (GRID:grid.443108.a) (ISNI:0000 0000 8550 5526); Bangabandhu Sheikh Mujibur Rahman Agricultural University, Department of Fisheries Management, Gazipur, Bangladesh (GRID:grid.443108.a) (ISNI:0000 0000 8550 5526)
2 Bangabandhu Sheikh Mujibur Rahman Science and Technology University, Department of Animal Science and Veterinary Medicine, Gopalganj, Bangladesh (GRID:grid.449329.1) (ISNI:0000 0004 4683 9733)
3 Bangabandhu Sheikh Mujibur Rahman Agricultural University, Institute of Biotechnology and Genetic Engineering, Gazipur, Bangladesh (GRID:grid.443108.a) (ISNI:0000 0000 8550 5526)
4 Curtin University, School of Molecular and Life Sciences, Bentley, Australia (GRID:grid.1032.0) (ISNI:0000 0004 0375 4078); Shahjalal University of Science and Technology, Department of Genetic Engineering and Biotechnology, Sylhet, Bangladesh (GRID:grid.412506.4) (ISNI:0000 0001 0689 2212)
5 University of Western Australia, Marshall Centre for Infectious Disease Research and Training. School of Biomedical Sciences, Perth, Australia (GRID:grid.1012.2) (ISNI:0000 0004 1936 7910)