Abstract

Rhodobacter (Rba.) capsulatus has been a favored model for studies of all aspects of bacterial photosynthesis. This purple phototroph contains PufX, a polypeptide crucial for dimerization of the light-harvesting 1–reaction center (LH1–RC) complex, but lacks protein-U, a U-shaped polypeptide in the LH1–RC of its close relative Rba. sphaeroides. Here we present a cryo-EM structure of the Rba. capsulatus LH1–RC purified by DEAE chromatography. The crescent-shaped LH1–RC exhibits a compact structure containing only 10 LH1 αβ-subunits. Four αβ-subunits corresponding to those adjacent to protein-U in Rba. sphaeroides were absent. PufX in Rba. capsulatus exhibits a unique conformation in its N-terminus that self-associates with amino acids in its own transmembrane domain and interacts with nearby polypeptides, preventing it from interacting with proteins in other complexes and forming dimeric structures. These features are discussed in relation to the minimal requirements for the formation of LH1–RC monomers and dimers, the spectroscopic behavior of both the LH1 and RC, and the bioenergetics of energy transfer from LH1 to the RC.

Rhodobacter capsulatus is a favored model organism for studying bacterial photosynthesis. Here the authors present a structure of its light-harvesting–reaction center complex, which reveals that it forms a crescent shape containing only 10 LH1 αβ-subunits.

Details

Title
Rhodobacter capsulatus forms a compact crescent-shaped LH1–RC photocomplex
Author
Tani, Kazutoshi 1   VIAFID ORCID Logo  ; Kanno, Ryo 2 ; Ji, Xuan-Cheng 3 ; Satoh, Itsusei 3 ; Kobayashi, Yuki 3 ; Hall, Malgorzata 4 ; Yu, Long-Jiang 5   VIAFID ORCID Logo  ; Kimura, Yukihiro 6   VIAFID ORCID Logo  ; Mizoguchi, Akira 1 ; Humbel, Bruno M. 7 ; Madigan, Michael T. 8 ; Wang-Otomo, Zheng-Yu 3   VIAFID ORCID Logo 

 Mie University, Graduate School of Medicine, Tsu, Japan (GRID:grid.260026.0) (ISNI:0000 0004 0372 555X) 
 Okinawa Institute of Science and Technology Graduate University (OIST), Scientific Imaging Section, Research Support Division, Okinawa, Japan (GRID:grid.250464.1) (ISNI:0000 0000 9805 2626); Okinawa Institute of Science and Technology Graduate University (OIST), Quantum wave microscopy unit, Okinawa, Japan (GRID:grid.250464.1) (ISNI:0000 0000 9805 2626) 
 Ibaraki University, Faculty of Science, Mito, Japan (GRID:grid.410773.6) (ISNI:0000 0000 9949 0476) 
 Okinawa Institute of Science and Technology Graduate University (OIST), Scientific Imaging Section, Research Support Division, Okinawa, Japan (GRID:grid.250464.1) (ISNI:0000 0000 9805 2626) 
 Chinese Academy of Sciences, Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Beijing, China (GRID:grid.9227.e) (ISNI:0000000119573309) 
 Kobe University, Department of Agrobioscience, Graduate School of Agriculture, Kobe, Japan (GRID:grid.31432.37) (ISNI:0000 0001 1092 3077) 
 Okinawa Institute of Science and Technology Graduate University (OIST), Scientific Imaging Section, Research Support Division, Okinawa, Japan (GRID:grid.250464.1) (ISNI:0000 0000 9805 2626); Juntendo University, Graduate School of Medicine, Department of Cell Biology and Neuroscience, Tokyo, Japan (GRID:grid.258269.2) (ISNI:0000 0004 1762 2738) 
 Southern Illinois University, School of Biological Sciences, Department of Microbiology, Carbondale, USA (GRID:grid.411026.0) (ISNI:0000 0001 1090 2313) 
Pages
846
Publication year
2023
Publication date
2023
Publisher
Nature Publishing Group
e-ISSN
20411723
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
2776891096
Copyright
© The Author(s) 2023. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.