Abstract

Grass pea (Lathyrus sativus L.) is a rich source of protein cultivated as an insurance crop in Ethiopia, Eritrea, India, Bangladesh, and Nepal. Its resilience to both drought and flooding makes it a promising crop for ensuring food security in a changing climate. The lack of genetic resources and the crop’s association with the disease neurolathyrism have limited the cultivation of grass pea. Here, we present an annotated, long read-based assembly of the 6.5 Gbp L. sativus genome. Using this genome sequence, we have elucidated the biosynthetic pathway leading to the formation of the neurotoxin, β-L-oxalyl-2,3-diaminopropionic acid (β-L-ODAP). The final reaction of the pathway depends on an interaction between L. sativus acyl-activating enzyme 3 (LsAAE3) and a BAHD-acyltransferase (LsBOS) that form a metabolon activated by CoA to produce β-L-ODAP. This provides valuable insight into the best approaches for developing varieties which produce substantially less toxin.

Grass pea is a multi-stress tolerant orphan crop and developing cultivars with decreased accumulation of the neurotoxin β-L-oxalyl-2,3-diaminopropionic acid (β-L-ODAP) is one of its breeding objectives. Here, the authors assemble its genome and reveal genes involved in the biosynthesis of β-L-ODAP.

Details

Title
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus
Author
Edwards, Anne 1   VIAFID ORCID Logo  ; Njaci, Isaac 2 ; Sarkar, Abhimanyu 3   VIAFID ORCID Logo  ; Jiang, Zhouqian 4   VIAFID ORCID Logo  ; Kaithakottil, Gemy George 5   VIAFID ORCID Logo  ; Moore, Christopher 6   VIAFID ORCID Logo  ; Cheema, Jitender 1 ; Stevenson, Clare E. M. 1   VIAFID ORCID Logo  ; Rejzek, Martin 1   VIAFID ORCID Logo  ; Novák, Petr 7   VIAFID ORCID Logo  ; Vigouroux, Marielle 1   VIAFID ORCID Logo  ; Vickers, Martin 1 ; Wouters, Roland H. M. 1   VIAFID ORCID Logo  ; Paajanen, Pirita 1   VIAFID ORCID Logo  ; Steuernagel, Burkhard 1   VIAFID ORCID Logo  ; Moore, Jonathan D. 1   VIAFID ORCID Logo  ; Higgins, Janet 8   VIAFID ORCID Logo  ; Swarbreck, David 8   VIAFID ORCID Logo  ; Martens, Stefan 9   VIAFID ORCID Logo  ; Kim, Colin Y. 10   VIAFID ORCID Logo  ; Weng, Jing-Ke 11   VIAFID ORCID Logo  ; Mundree, Sagadevan 12   VIAFID ORCID Logo  ; Kilian, Benjamin 13   VIAFID ORCID Logo  ; Kumar, Shiv 14   VIAFID ORCID Logo  ; Loose, Matt 6   VIAFID ORCID Logo  ; Yant, Levi 15   VIAFID ORCID Logo  ; Macas, Jiří 16   VIAFID ORCID Logo  ; Wang, Trevor L. 1   VIAFID ORCID Logo  ; Martin, Cathie 1   VIAFID ORCID Logo  ; Emmrich, Peter M. F. 17   VIAFID ORCID Logo 

 John Innes Centre, Norwich Research Park, Norwich, UK (GRID:grid.14830.3e) (ISNI:0000 0001 2175 7246) 
 John Innes Centre, Norwich Research Park, Norwich, UK (GRID:grid.14830.3e) (ISNI:0000 0001 2175 7246); Biosciences eastern and central Africa International Livestock Research Institute Hub, Nairobi, Kenya (GRID:grid.419369.0) (ISNI:0000 0000 9378 4481); Queensland University of Technology, Brisbane City, Australia (GRID:grid.1024.7) (ISNI:0000 0000 8915 0953) 
 John Innes Centre, Norwich Research Park, Norwich, UK (GRID:grid.14830.3e) (ISNI:0000 0001 2175 7246); National Institute of Agricultural Botany, Cambridge, UK (GRID:grid.17595.3f) (ISNI:0000 0004 0383 6532) 
 John Innes Centre, Norwich Research Park, Norwich, UK (GRID:grid.14830.3e) (ISNI:0000 0001 2175 7246); Capital Medical University, You An Men, School of Traditional Chinese Medicine, Beijing, PR China (GRID:grid.24696.3f) (ISNI:0000 0004 0369 153X) 
 Earlham Institute, Norwich Research Park, Colney Lane, Norwich, UK (GRID:grid.24696.3f) 
 School of Life Sciences, University of Nottingham, University Park, Nottingham, UK (GRID:grid.4563.4) (ISNI:0000 0004 1936 8868) 
 Institute of Plant Molecular Biology, Biology Centre CAS, Ceske Budejovice, Czech Republic (GRID:grid.14830.3e) 
 Earlham Institute, Norwich Research Park, Colney Lane, Norwich, UK (GRID:grid.14830.3e) 
 Research and Innovation Centre, Fondazione Edmund Mach, San Michele all’ Adige (TN), Italy (GRID:grid.424414.3) (ISNI:0000 0004 1755 6224) 
10  Whitehead Institute for Biomedical Research, Cambridge, USA (GRID:grid.270301.7) (ISNI:0000 0001 2292 6283); Massachusetts Institute of Technology, Department of Biological Engineering, Cambridge, USA (GRID:grid.116068.8) (ISNI:0000 0001 2341 2786) 
11  Whitehead Institute for Biomedical Research, Cambridge, USA (GRID:grid.270301.7) (ISNI:0000 0001 2292 6283); Massachusetts Institute of Technology, Department of Biology, Cambridge, USA (GRID:grid.116068.8) (ISNI:0000 0001 2341 2786) 
12  Queensland University of Technology, Brisbane City, Australia (GRID:grid.1024.7) (ISNI:0000 0000 8915 0953) 
13  Global Crop Diversity Trust, Bonn, Germany (GRID:grid.1024.7) (ISNI:0000 0004 9425 9522) 
14  International Center for Agricultural Research in the Dry Areas, Avenue Hafiane Cherkaoui, Rabat, Morocco (GRID:grid.1024.7) 
15  School of Life Sciences, University of Nottingham, University Park, Nottingham, UK (GRID:grid.4563.4) (ISNI:0000 0004 1936 8868); University of Nottingham, Future Food Beacon of Excellence, Nottingham, UK (GRID:grid.4563.4) (ISNI:0000 0004 1936 8868) 
16  Institute of Plant Molecular Biology, Biology Centre CAS, Ceske Budejovice, Czech Republic (GRID:grid.4563.4) 
17  John Innes Centre, Norwich Research Park, Norwich, UK (GRID:grid.14830.3e) (ISNI:0000 0001 2175 7246); Biosciences eastern and central Africa International Livestock Research Institute Hub, Nairobi, Kenya (GRID:grid.419369.0) (ISNI:0000 0000 9378 4481); University of East Anglia, Norwich Institute for Sustainable Development, School of International Development, Norwich, UK (GRID:grid.8273.e) (ISNI:0000 0001 1092 7967) 
Pages
876
Publication year
2023
Publication date
2023
Publisher
Nature Publishing Group
e-ISSN
20411723
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
2777196990
Copyright
© The Author(s) 2023. corrected publication 2023. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.