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Abstract
The role of the serine/glycine metabolic pathway (SGP) has recently been demonstrated in tumors; however, the pathological relevance of the SGP in thyroid cancer remains unexplored. Here, we perform metabolomic profiling of 17 tumor-normal pairs; bulk transcriptomics of 263 normal thyroid, 348 papillary, and 21 undifferentiated thyroid cancer samples; and single-cell transcriptomes from 15 cases, showing the impact of mitochondrial one-carbon metabolism in thyroid tumors. High expression of serine hydroxymethyltransferase-2 (SHMT2) and methylenetetrahydrofolate dehydrogenase 2 (MTHFD2) is associated with low thyroid differentiation scores and poor clinical features. A subpopulation of tumor cells with high mitochondrial one-carbon pathway activity is observed in the single-cell dataset. SHMT2 inhibition significantly compromises mitochondrial respiration and decreases cell proliferation and tumor size in vitro and in vivo. Collectively, our results highlight the importance of the mitochondrial one-carbon pathway in undifferentiated thyroid cancer and suggest that SHMT2 is a potent therapeutic target.
Different types of metabolic rewiring are reported to drive cancer development and as a potential therapeutic target. Here, the authors perform multi-omics analyses in a cohort of human normal and malignant thyroid samples and show association of mitochondrial one-carbon metabolism with undifferentiated thyroid cancer.
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1 Chungnam National University, Research Center for Endocrine and Metabolic Disease, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377); Chungnam National University, Research Institute for Medical Sciences, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377)
2 GENOME INSIGHT TECHNOLOGY Inc, Daejeon, Republic of Korea (GRID:grid.511166.4); Stanford University School of Medicine, Stanford Cancer Institute, Stanford, USA (GRID:grid.168010.e) (ISNI:0000000419368956)
3 Chungnam National University, Research Institute for Medical Sciences, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377); Chungnam National University, Department of Otolaryngology-Head and Neck Surgery, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377)
4 Chungnam National University, Department of Otolaryngology-Head and Neck Surgery, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377)
5 Chungnam National University, Department of Surgery, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377)
6 Seoul National University College of Medicine, Department of Otolaryngology-Head and Neck Surgery, Seoul, Republic of Korea (GRID:grid.31501.36) (ISNI:0000 0004 0470 5905)
7 Seoul National University College of Medicine, Department of Internal Medicine, Seoul, Republic of Korea (GRID:grid.31501.36) (ISNI:0000 0004 0470 5905)
8 Seoul National University Bundang Hospital, Department of Surgery, Seongnam-si, Republic of Korea (GRID:grid.412480.b) (ISNI:0000 0004 0647 3378)
9 Chungnam National University, Department of Pathology, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377)
10 GENOME INSIGHT TECHNOLOGY Inc, Daejeon, Republic of Korea (GRID:grid.511166.4)
11 Chungnam National University, Department of Biochemistry, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377)
12 Seoul National University, College of Pharmacy, Seoul, Republic of Korea (GRID:grid.31501.36) (ISNI:0000 0004 0470 5905)
13 Korea Research Institute of Bioscience and Biotechnology, Deajeon, Republic of Korea (GRID:grid.249967.7) (ISNI:0000 0004 0636 3099)
14 Korea Research Institute of Bioscience and Biotechnology, Deajeon, Republic of Korea (GRID:grid.249967.7) (ISNI:0000 0004 0636 3099); University of Science and Technology (UST), Department of Bioscience, Deajeon, Republic of Korea (GRID:grid.412786.e) (ISNI:0000 0004 1791 8264)
15 Korea Research Institute of Bioscience and Biotechnology, Deajeon, Republic of Korea (GRID:grid.249967.7) (ISNI:0000 0004 0636 3099); University of Science and Technology (UST), Department of Bioscience, Deajeon, Republic of Korea (GRID:grid.412786.e) (ISNI:0000 0004 1791 8264); Korea Research Institute of Bioscience and Biotechnology, Korea Bioinformation Center (KOBIC), Daejeon, Republic of Korea (GRID:grid.249967.7) (ISNI:0000 0004 0636 3099)
16 Wenzhou Medical University, Department of Nutrition, School of Public Health and Management, Wenzhou, China (GRID:grid.268099.c) (ISNI:0000 0001 0348 3990)
17 Chungnam National University, Department of Biochemistry, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377)
18 Korea University, Department of Biotechnology, College of Life Sciences and Biotechnology, Seoul, Republic of Korea (GRID:grid.222754.4) (ISNI:0000 0001 0840 2678)
19 University of California, Los Angeles, Department of Chemical and Biomolecular Engineering, Los Angeles, USA (GRID:grid.19006.3e) (ISNI:0000 0000 9632 6718)
20 GENOME INSIGHT TECHNOLOGY Inc, Daejeon, Republic of Korea (GRID:grid.511166.4); Korea Advanced Institute of Science and Technology, Graduate School of Medical Science and Engineering, Daejeon, Republic of Korea (GRID:grid.37172.30) (ISNI:0000 0001 2292 0500)
21 Korea Advanced Institute of Science and Technology, Graduate School of Medical Science and Engineering, Daejeon, Republic of Korea (GRID:grid.37172.30) (ISNI:0000 0001 2292 0500)
22 Chungnam National University, Research Center for Endocrine and Metabolic Disease, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377); Chungnam National University, Research Institute for Medical Sciences, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377); Chungnam National University, Division of Endocrinology and Metabolism, Department of Internal Medicine, College of Medicine, Daejeon, Republic of Korea (GRID:grid.254230.2) (ISNI:0000 0001 0722 6377)