Abstract

Background

Abnormal expression of protein tyrosine kinase 6 (PTK6) has been proven to be involved in the development of gynecological tumors. However, its immune-related carcinogenic mechanism in other tumors remains unclear.

Objective

The aim of this study was to identify PTK6 as a novel prognostic biomarker in pan-cancer, especially in lung adenocarcinoma (LUAD), which is correlated with immune infiltration, and to clarify its clinicopathological and prognostic significance.

Methods

The prognostic value and immune relevance of PTK6 were investigated by using bio-informatics in this study. PTK6 expression was validated in vitro experiments (lung cancer cell lines PC9, NCI-H1975, and HCC827; human normal lung epithelial cells BEAS-2B). Western blot (WB) revealed the PTK6 protein expression in lung cancer cell lines. PTK6 expression was inhibited by Tilfrinib. Colony formation and the Cell Counting Kit-8 (CCK-8) assay were used to detect cell proliferation. The wound healing and trans-well were performed to analyze the cell migration capacity. Then flow cytometry was conducted to evaluate the cell apoptosis. Eventually, the relationship between PTK6 and immune checkpoints was examined. WB was used to estimate the PD-L1 expression at different Tilfrinib doses.

Results

PTK6 was an independent predictive factor for LUAD and was substantially expressed in LUAD. Pathological stage was significantly correlated with increased PTK6 expression. In accordance with survival analysis, poor survival rate in LUAD was associated with a high expression level of PTK6. Functional enrichment of the cell cycle and TGF-β signaling pathway was demonstrated by KEGG and GSEA analysis. Moreover, PTK6 expression considerably associated with immune infiltration in LUAD, as determined by immune analysis. Thus, the result of vitro experiments indicated that cell proliferation and migration were inhibited by the elimination of PTK6. Additionally, PTK6 suppression induced cell apoptosis. Obviously, PD-L1 protein expression level up-regulated while PTK6 was suppressed.

Conclusion

PTK6 has predictive value for LUAD prognosis, and could up regulated PD-L1.

Details

Title
Identification of immune-associated biomarker for predicting lung adenocarcinoma: bioinformatics analysis and experiment verification of PTK6
Author
Xiong, Ren-Hui 1 ; Yang, Shuo-Qi 1 ; Li, Ji-Wei 1 ; Shen, Xun-kai 1 ; Jin, Lu-Ming 2 ; Chen, Chao-Yang 2 ; Yue, Yu-Ting 1 ; Yu, Zhi-Chen 2 ; Sun, Qing-Yu 2 ; Jiang, Wen 3 ; Jiang, Ming-Zheng 1 ; Wang, Xiao-Yan 2 ; Song, Shi-Xu 1 ; Cao, Dai 1 ; Ye, Hong-li 1 ; Zhao, Li-Ran 1 ; Huang, Li-Peng 2 ; Bu, Liang 2 

 Xiamen University, School of Medicine, Xiamen, China (GRID:grid.12955.3a) (ISNI:0000 0001 2264 7233) 
 Xiang’an Hospital of Xiamen University, School of Medicine, Xiamen University, Department of Thoracic Surgery, Xiamen, China (GRID:grid.12955.3a) (ISNI:0000 0001 2264 7233) 
 The First People’s Hospital of Yunnan Province, Department of Thoracic Surgery, Kunming, China (GRID:grid.414918.1) 
Pages
102
Publication year
2024
Publication date
Dec 2024
Publisher
Springer Nature B.V.
e-ISSN
27306011
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
3032847726
Copyright
© The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.