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Abstract
Cells must sense and respond to sudden maladaptive environmental changes—stresses—to survive and thrive. Across eukaryotes, stresses such as heat shock trigger conserved responses: growth arrest, a specific transcriptional response, and biomolecular condensation of protein and mRNA into structures known as stress granules under severe stress. The composition, formation mechanism, adaptive significance, and even evolutionary conservation of these condensed structures remain enigmatic. Here we provide a remarkable view into stress-triggered condensation, its evolutionary conservation and tuning, and its integration into other well-studied aspects of the stress response. Using three morphologically near-identical budding yeast species adapted to different thermal environments and diverged by up to 100 million years, we show that proteome-scale biomolecular condensation is tuned to species-specific thermal niches, closely tracking corresponding growth and transcriptional responses. In each species, poly(A)-binding protein—a core marker of stress granules—condenses in isolation at species-specific temperatures, with conserved molecular features and conformational changes modulating condensation. From the ecological to the molecular scale, our results reveal previously unappreciated levels of evolutionary selection in the eukaryotic stress response, while establishing a rich, tractable system for further inquiry.
Cells must respond to environmental changes. In three fungal species adapted to different temperatures, cellular responses are conserved yet tuned to each organism’s thermal niche, including the formation of adaptive biomolecular condensates.
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1 The University of Chicago, Committee on Genetics, Genomics, and Systems Biology, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822)
2 The University of Chicago, Department of Biochemistry and Molecular Biology, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822)
3 The University of Chicago, Graduate Program in Biophysical Sciences, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822); The University of Chicago, Interdisciplinary Scientist Training Program, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822)
4 University of Chicago, Pritzker School of Molecular Engineering, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822); University of Chicago, Institute for Biophysical Dynamics, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822)
5 MS Bioworks, Ann Arbor, USA (GRID:grid.170205.1)
6 The University of Chicago, Department of Biochemistry and Molecular Biology, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822); University of Chicago, Institute for Biophysical Dynamics, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822)
7 The University of Chicago, Department of Biochemistry and Molecular Biology, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822); University of Chicago, Institute for Biophysical Dynamics, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822); The University of Chicago, Department of Medicine, Section of Genetic Medicine, Chicago, USA (GRID:grid.170205.1) (ISNI:0000 0004 1936 7822)