Abstract

More than half of the world’s rivers dry up periodically, but our understanding of the biological communities in dry riverbeds remains limited. Specifically, the roles of dispersal, environmental filtering and biotic interactions in driving biodiversity in dry rivers are poorly understood. Here, we conduct a large-scale coordinated survey of patterns and drivers of biodiversity in dry riverbeds. We focus on eight major taxa, including microorganisms, invertebrates and plants: Algae, Archaea, Bacteria, Fungi, Protozoa, Arthropods, Nematodes and Streptophyta. We use environmental DNA metabarcoding to assess biodiversity in dry sediments collected over a 1-year period from 84 non-perennial rivers across 19 countries on four continents. Both direct factors, such as nutrient and carbon availability, and indirect factors such as climate influence the local biodiversity of most taxa. Limited resource availability and prolonged dry phases favor oligotrophic microbial taxa. Co-variation among taxa, particularly Bacteria, Fungi, Algae and Protozoa, explain more spatial variation in community composition than dispersal or environmental gradients. This finding suggests that biotic interactions or unmeasured ecological and evolutionary factors may strongly influence communities during dry phases, altering biodiversity responses to global changes.

Over half the world’s rivers dry periodically, yet little is known about the biological communities in dry riverbeds. This study examines biodiversity across 84 non-perennial rivers in 19 countries using DNA metabarcoding. It finds that nutrient availability, climate and biotic interactions influence the biodiversity of these dry environments.

Details

Title
Unravelling large-scale patterns and drivers of biodiversity in dry rivers
Author
Foulquier, Arnaud 1   VIAFID ORCID Logo  ; Datry, Thibault 2   VIAFID ORCID Logo  ; Corti, Roland 2 ; von Schiller, Daniel 3 ; Tockner, Klement 4 ; Stubbington, Rachel 5   VIAFID ORCID Logo  ; Gessner, Mark O. 6   VIAFID ORCID Logo  ; Boyer, Frédéric 1   VIAFID ORCID Logo  ; Ohlmann, Marc 1 ; Thuiller, Wilfried 1 ; Rioux, Delphine 1 ; Miquel, Christian 1 ; Albariño, Ricardo 7   VIAFID ORCID Logo  ; Allen, Daniel C. 8   VIAFID ORCID Logo  ; Altermatt, Florian 9   VIAFID ORCID Logo  ; Arce, Maria Isabel 10 ; Arnon, Shai 11   VIAFID ORCID Logo  ; Banas, Damien 12 ; Banegas-Medina, Andy 13 ; Beller, Erin 14 ; Blanchette, Melanie L. 15 ; Blessing, Joanna 16   VIAFID ORCID Logo  ; Boëchat, Iola Gonçalves 17 ; Boersma, Kate 18   VIAFID ORCID Logo  ; Bogan, Michael 19 ; Bonada, Núria 20   VIAFID ORCID Logo  ; Bond, Nick 21   VIAFID ORCID Logo  ; Brintrup, Katherine 22 ; Bruder, Andreas 23   VIAFID ORCID Logo  ; Burrows, Ryan 24 ; Cancellario, Tommaso 25 ; Canhoto, Cristina 26   VIAFID ORCID Logo  ; Carlson, Stephanie 27   VIAFID ORCID Logo  ; Cid, Núria 28   VIAFID ORCID Logo  ; Cornut, Julien 29 ; Danger, Michael 29 ; de Freitas Terra, Bianca 30 ; De Girolamo, Anna Maria 31   VIAFID ORCID Logo  ; del Campo, Rubén 32   VIAFID ORCID Logo  ; Díaz Villanueva, Verónica 33 ; Dyer, Fiona 34   VIAFID ORCID Logo  ; Elosegi, Arturo 35   VIAFID ORCID Logo  ; Febria, Catherine 36   VIAFID ORCID Logo  ; Figueroa Jara, Ricardo 37   VIAFID ORCID Logo  ; Four, Brian 38 ; Gafny, Sarig 39 ; Gómez, Rosa 40   VIAFID ORCID Logo  ; Gómez-Gener, Lluís 41 ; Guareschi, Simone 42   VIAFID ORCID Logo  ; Gücker, Björn 17   VIAFID ORCID Logo  ; Hwan, Jason 43 ; Jones, J. Iwan 44 ; Kubheka, Patrick S. 45 ; Laini, Alex 42   VIAFID ORCID Logo  ; Langhans, Simone Daniela 46   VIAFID ORCID Logo  ; Launay, Bertrand 2 ; Le Goff, Guillaume 2 ; Leigh, Catherine 47   VIAFID ORCID Logo  ; Little, Chelsea 48 ; Lorenz, Stefan 49 ; Marshall, Jonathan 50 ; Martin Sanz, Eduardo J. 51 ; McIntosh, Angus 52   VIAFID ORCID Logo  ; Mendoza-Lera, Clara 53   VIAFID ORCID Logo  ; Meyer, Elisabeth I. 54   VIAFID ORCID Logo  ; Miliša, Marko 55   VIAFID ORCID Logo  ; Mlambo, Musa C. 56   VIAFID ORCID Logo  ; Morais, Manuela 57 ; Moya, Nabor 58   VIAFID ORCID Logo  ; Negus, Peter 16   VIAFID ORCID Logo  ; Niyogi, Dev 59 ; Pagán, Iluminada 60 ; Papatheodoulou, Athina 61 ; Pappagallo, Giuseppe 31   VIAFID ORCID Logo  ; Pardo, Isabel 62   VIAFID ORCID Logo  ; Pařil, Petr 63   VIAFID ORCID Logo  ; Pauls, Steffen U. 64 ; Polášek, Marek 63 ; Rodríguez-Lozano, Pablo 65 ; Rolls, Robert J. 66 ; Sánchez-Montoya, Maria Mar 67 ; Savić, Ana 68 ; Shumilova, Oleksandra 69   VIAFID ORCID Logo  ; Sridhar, Kandikere R. 70   VIAFID ORCID Logo  ; Steward, Alisha 50   VIAFID ORCID Logo  ; Taleb, Amina 71 ; Uzan, Avi 72 ; Valladares, Yefrin 73 ; Vander Vorste, Ross 74 ; Waltham, Nathan J. 75   VIAFID ORCID Logo  ; Zak, Dominik H. 76   VIAFID ORCID Logo  ; Zoppini, Annamaria 31   VIAFID ORCID Logo 

 Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, Grenoble, France (GRID:grid.462909.0) (ISNI:0000 0004 0609 8934) 
 INRAE, UR RiverLY, Centre de Lyon-Villeurbanne, Villeurbanne Cedex, France (GRID:grid.507621.7) 
 University of Barcelona, Department of Evolutionary Biology, Ecology and Environmental Sciences, Faculty of Biology, Barcelona, Spain (GRID:grid.5841.8) (ISNI:0000 0004 1937 0247) 
 Department of BioSciences, Goethe Universität Frankfurt, Frankfurt aM, Germany (GRID:grid.7839.5) (ISNI:0000 0004 1936 9721); Senckenberg Gesellschaft für Naturforschung, Frankfurt aM, Germany (GRID:grid.438154.f) (ISNI:0000 0001 0944 0975) 
 Nottingham Trent University, School of Science and Technology, Nottingham, UK (GRID:grid.12361.37) (ISNI:0000 0001 0727 0669) 
 Berlin Institute of Technology (TU Berlin), Berlin, Germany (GRID:grid.6734.6) (ISNI:0000 0001 2292 8254); Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Zur alten Fischerhütte 2, Department of Plankton and Microbial Ecology, Stechlin, Germany (GRID:grid.419247.d) (ISNI:0000 0001 2108 8097) 
 INIBIOMA-CONICET, Quintral 1250, Bariloche, Argentina (GRID:grid.462909.0) 
 Department of Ecosystem Science and Management, The Pennsylvania State University, University Park, USA (GRID:grid.29857.31) (ISNI:0000 0001 2097 4281) 
 University of Zurich, Department of Evolutionary Biology and Environmental Studies, Zürich, Switzerland (GRID:grid.7400.3) (ISNI:0000 0004 1937 0650) 
10  Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Zur alten Fischerhütte 2, Department of Plankton and Microbial Ecology, Stechlin, Germany (GRID:grid.419247.d) (ISNI:0000 0001 2108 8097); Department of Ecology and Hydrology, University of Murcia, Murcia, Spain (GRID:grid.10586.3a) (ISNI:0000 0001 2287 8496) 
11  The J. Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Zuckerberg Institute for Water Research, Negev, Israel (GRID:grid.7489.2) (ISNI:0000 0004 1937 0511) 
12  Université de Lorraine, INRAE, URAFPA, Nancy, France (GRID:grid.29172.3f) (ISNI:0000 0001 2194 6418) 
13  Laboratory of Biology, Department of Sciences, Carretera Panamericana, frente Hospital Regional, El Paraíso, Universidad Nacional Autónoma de Honduras—Tecnológico Danli, Danlí, Honduras (GRID:grid.10601.36) (ISNI:0000 0001 2297 2829) 
14  Real Estate and Workplace Services Sustainability Team, Google, Mountain View, USA (GRID:grid.432839.7) 
15  Edith Cowan University, Mine Water and Environment Research Centre (MiWER), Joondalup, Australia (GRID:grid.1038.a) (ISNI:0000 0004 0389 4302) 
16  Queensland Government, Department of Environment, Science and Innovation, Brisbane, Australia (GRID:grid.453171.5) (ISNI:0000 0004 0380 0628) 
17  Federal University of São João del-Rei, Department of Geosciences, Campus Tancredo Neves, São João del-Rei, Brazil (GRID:grid.428481.3) (ISNI:0000 0001 1516 3599) 
18  Department of Biology, University of San Diego, San Diego, USA (GRID:grid.267102.0) (ISNI:0000 0001 0448 5736) 
19  University of Arizona, School of Natural Resources and the Environment, Tucson, USA (GRID:grid.134563.6) (ISNI:0000 0001 2168 186X) 
20  Facultat de Biologia, Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Avda Diagonal 643, FEHM-Lab (Freshwater Ecology, Hydrology and Management), Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Barcelona, Spain (GRID:grid.5841.8) (ISNI:0000 0004 1937 0247) 
21  Biomedicine and Environment, La Trobe University, Centre for Freshwater Ecosystems, School of Agriculture, Wodonga, Australia (GRID:grid.1018.8) (ISNI:0000 0001 2342 0938) 
22  Universidad San Sebastián, Facultad de Ingeniería, Arquitectura y Diseño, Concepción, Chile (GRID:grid.442215.4) (ISNI:0000 0001 2227 4297) 
23  SUPSI, Institute of Microbiology, Mendrisio, Switzerland (GRID:grid.16058.3a) (ISNI:0000000123252233) 
24  The University of Melbourne, Burnley Campus, The School of Agriculture, Food and Ecosystem Sciences, Victoria, Australia (GRID:grid.1008.9) (ISNI:0000 0001 2179 088X) 
25  University of the Balearic Islands, Balearic Biodiversity Centre, Department of Biology, Palma, Spain (GRID:grid.9563.9) (ISNI:0000 0001 1940 4767) 
26  University of Coimbra, Centre for Functional Ecology, Department of Life Sciences, Coimbra, Portugal (GRID:grid.8051.c) (ISNI:0000 0000 9511 4342) 
27  University of California, Berkeley, Berkeley, USA (GRID:grid.468726.9) (ISNI:0000 0004 0486 2046) 
28  Facultat de Biologia, Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB), Avda Diagonal 643, FEHM-Lab (Freshwater Ecology, Hydrology and Management), Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Barcelona, Spain (GRID:grid.5841.8) (ISNI:0000 0004 1937 0247); IRTA Marine and Continental Waters Programme, La Ràpita, Spain (GRID:grid.8581.4) (ISNI:0000 0001 1943 6646) 
29  Université de Lorraine, LIEC UMR CNRS 7360, Metz, France (GRID:grid.29172.3f) (ISNI:0000 0001 2194 6418) 
30  Universidade Estadual Vale do Acaraú, Centro de Ciências Agrárias e Biológicas, Campus Betânia, Brazil (GRID:grid.442232.1) (ISNI:0000 0000 9350 3483) 
31  National Research Council (IRSA-CNR), Area della Ricerca RM1, via Salaria km 29.300, Monterotondo, Water Research Institute, Rome, Italy (GRID:grid.435629.f) (ISNI:0000 0004 1755 3971) 
32  Department of Ecology, University of Innsbruck, Innsbruck, Austria (GRID:grid.5771.4) (ISNI:0000 0001 2151 8122) 
33  INIBIOMA-CONICET, Quintral 1250, Bariloche, Argentina (GRID:grid.5771.4) 
34  University of Canberra, Centre for Applied Water Science, Canberra, Australia (GRID:grid.1039.b) (ISNI:0000 0004 0385 7472) 
35  Department of Plant Biology and Ecology, University of the Basque Country (UPV, EHU), Bilbao, Spain (GRID:grid.11480.3c) (ISNI:0000 0001 2167 1098) 
36  University of Windsor, Great Lakes Institute for Environmental Research and Department of Integrative Biology, Windsor, Canada (GRID:grid.267455.7) (ISNI:0000 0004 1936 9596) 
37  Barrio Universitario, Centro EULA, Universidad de Concepción, Facultad de Ciencias Ambientales, Centro EULA, Concepción, Chile (GRID:grid.5380.e) (ISNI:0000 0001 2298 9663) 
38  UAR 3514 CNRS Stella Mare, Université de Corse, Biguglia, France (GRID:grid.412058.a) (ISNI:0000 0001 2177 0037) 
39  Ruppin Academic Center, Faculty of Marine Sciences, Michmoret, Israel (GRID:grid.443022.3) (ISNI:0000 0004 0636 0840) 
40  Department of Ecology and Hydrology, University of Murcia, Murcia, Spain (GRID:grid.10586.3a) (ISNI:0000 0001 2287 8496) 
41  Campus de Bellaterra (UAB), Centre for Research on Ecology and Forestry Applications (CREAF), Barcelona, Spain (GRID:grid.452388.0) (ISNI:0000 0001 0722 403X) 
42  University of Turin, Department of Life Sciences and Systems Biology, Torino, Italy (GRID:grid.7605.4) (ISNI:0000 0001 2336 6580) 
43  California Department of Fish and Wildlife, Ontario, USA (GRID:grid.448376.a) (ISNI:0000 0004 0606 2165) 
44  Queen Mary University of London, London, UK (GRID:grid.4868.2) (ISNI:0000 0001 2171 1133) 
45  Ezemvelo KZN Wildlife, Pietermaritzburg, South Africa (GRID:grid.4868.2) 
46  NIVA - Norwegian Institute for Water Research, Oslo, Norway (GRID:grid.6407.5) (ISNI:0000 0004 0447 9960) 
47  RMIT University, Biosciences and Food Technology Discipline, School of Science, Bundoora, Australia (GRID:grid.1017.7) (ISNI:0000 0001 2163 3550) 
48  University of Zurich, Department of Evolutionary Biology and Environmental Studies, Zürich, Switzerland (GRID:grid.7400.3) (ISNI:0000 0004 1937 0650); Simon Fraser University, Burnaby, Canada (GRID:grid.61971.38) (ISNI:0000 0004 1936 7494) 
49  Julius-Kühn-Institute, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Königin-Luise-Straße 19, Berlin, Germany (GRID:grid.13946.39) (ISNI:0000 0001 1089 3517) 
50  Queensland Government, Department of Environment, Science and Innovation, Brisbane, Australia (GRID:grid.453171.5) (ISNI:0000 0004 0380 0628); Griffith University, Australian Rivers Institute, Nathan, Australia (GRID:grid.1022.1) (ISNI:0000 0004 0437 5432) 
51  Swiss Federal Institute for Aquatic Science and Technology (Eawag), Dübendorf, Switzerland (GRID:grid.418656.8) (ISNI:0000 0001 1551 0562) 
52  School of Biological Sciences, University of Canterbury, Christchurch, New Zealand (GRID:grid.21006.35) (ISNI:0000 0001 2179 4063) 
53  iES, RPTU,University of Kaiserslautern-Landau, Forstrstr. 7, Landau, Germany (GRID:grid.519840.1) 
54  Institute for Evolution and Biodiversity, University of Münster, Münster, Germany (GRID:grid.5949.1) (ISNI:0000 0001 2172 9288) 
55  University of Zagreb, Division of Zoology, Faculty of Science, Zagreb, Croatia (GRID:grid.4808.4) (ISNI:0000 0001 0657 4636) 
56  Albany Museum, Makhanda (Grahamstown), Department of Freshwater Invertebrates, Makhanda, South Africa (GRID:grid.91354.3a) (ISNI:0000 0001 2364 1300) 
57  P.I.T.E, Rua da Barba Rala No. 1, Water Laboratory, University of Évora, Évora, Portugal (GRID:grid.8389.a) (ISNI:0000 0000 9310 6111) 
58  Universidad San Francisco Xavier, Calle Dalence N° 235, Instituto Experimental de Biología, Sucre, Bolivia (GRID:grid.441965.b) (ISNI:0000 0001 2116 8986) 
59  Missouri University of Science and Technology, Rolla, USA (GRID:grid.260128.f) (ISNI:0000 0000 9364 6281) 
60  Asociación Meles, Plaza de las Américas, 13, 2B, Alhama de Murcia, Spain (GRID:grid.260128.f) 
61  Open University of Cyprus PO Box 12794, Nicosia, Cyprus (GRID:grid.6603.3) (ISNI:0000 0001 2116 7908) 
62  University of Vigo, Department of Ecology and Animal Biology, Vigo, Spain (GRID:grid.6312.6) (ISNI:0000 0001 2097 6738) 
63  Faculty of Science, Department of Botany and Zoology, Masaryk University, Brno, Czech Republic (GRID:grid.10267.32) (ISNI:0000 0001 2194 0956) 
64  Senckenberg Biodiversity and Climate Research Centre (BiK-F), Senckenberganlage 25, Frankfurt am Main, Germany (GRID:grid.507705.0) (ISNI:0000 0001 2262 0292) 
65  University of the Balearic Islands, Department of Geography, Palma, Spain (GRID:grid.9563.9) (ISNI:0000 0001 1940 4767) 
66  University of New England, School of Environmental and Rural Science, Armidale, Australia (GRID:grid.1020.3) (ISNI:0000 0004 1936 7371) 
67  Department of Biodiversity, Ecology and Evolution, Faculty of Biology, Complutense University of Madrid, Madrid, Spain (GRID:grid.4795.f) (ISNI:0000 0001 2157 7667) 
68  Faculty of Science and Mathematics, Department of Biology and Ecology, University of Niš, Niš, Serbia (GRID:grid.11374.30) (ISNI:0000 0001 0942 1176) 
69  Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Department of Evolutionary and Integrative Ecology, Berlin, Germany (GRID:grid.419247.d) (ISNI:0000 0001 2108 8097) 
70  Mangalore University, Mangalagangotri, Department of Biosciences, Mangalore, India (GRID:grid.411630.1) (ISNI:0000 0001 0359 2206) 
71  University of Tlemcen, Tlemcen, Algeria (GRID:grid.12319.38) (ISNI:0000 0004 0370 1320) 
72  Israel Nature and Parks Authority, Jerusalem, Israel (GRID:grid.12319.38) 
73  Facultad de Ciencias, Escuela de Biología, Departamento de Ecología y Recursos Naturales, Boulevard Suyapa, Universidad Nacional Autónoma de Honduras, Tegucigalpa, Honduras (GRID:grid.10601.36) (ISNI:0000 0001 2297 2829) 
74  Biology Department, University of Wisconsin-La Crosse, La Crosse, USA (GRID:grid.267462.3) (ISNI:0000 0001 2169 5137) 
75  James Cook University, Bebegu Yumba Campus, Centre for Tropical Water and Aquatic Ecosystem Research, Townsville, Australia (GRID:grid.1011.1) (ISNI:0000 0004 0474 1797) 
76  Aarhus University, Department of Ecoscience, Aarhus C, Denmark (GRID:grid.7048.b) (ISNI:0000 0001 1956 2722) 
Pages
7233
Publication year
2024
Publication date
2024
Publisher
Nature Publishing Group
e-ISSN
20411723
Source type
Scholarly Journal
Language of publication
English
ProQuest document ID
3095826140
Copyright
© The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by-nc-nd/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.