Policing Cancer: Vitamin D Arrests the Cell Cycle

Abstract

Vitamin D is a steroid hormone crucial for bone mineral metabolism. In addition, vitamin D has pleiotropic actions in the body, including anti-cancer actions. These anti-cancer properties observed within in vitro studies frequently report the reduction of cell proliferation by interruption of the cell cycle by the direct alteration of cell cycle regulators which induce cell cycle arrest. The most recurrent reported mode of cell cycle arrest by vitamin D is at the G1/G0 phase of the cell cycle. This arrest is mediated by p21 and p27 upregulation, which results in suppression of cyclin D and E activity which leads to G1/G0 arrest. In addition, vitamin D treatments within in vitro cell lines have observed a reduced C-MYC expression and increased retinoblastoma protein levels that also result in G1/G0 arrest. In contrast, G2/M arrest is reported rarely within in vitro studies, and the mechanisms of this arrest are poorly described. Although the relationship of epigenetics on vitamin D metabolism is acknowledged, studies exploring a direct relationship to cell cycle perturbation is limited. In this review, we examine in vitro evidence of vitamin D and vitamin D metabolites directly influencing cell cycle regulators and inducing cell cycle arrest in cancer cell lines.

1. Introduction

Cancer can be described as a heterogeneous disease characterized by uncontrolled cell growth, invasion, and spread from the original site of the disease to several other sites in the body (metastasis) [1]. Cancer is a major cause of death and a barrier to increasing life expectancy in every country of the world in the 21st century, and this is a major global health burden [2]. The need to develop efficient treatments to combat this deadly disease is crucial with a multitude of avenues currently being investigated.

Over the last four decades, observational, pre-clinical, and clinical studies have demonstrated the potential anti-cancer role of vitamin D [3,4]. Almost four decades ago, epidemiological data on sunlight (UVB) exposure and low latitude—both factors that result in higher vitamin D production—showed a lower incidence in colorectal cancer [5]. At the same time, Colston et al. [6] demonstrated reduced cell proliferation of melanoma cell cultures treated with fully activated endogenous vitamin D hormone, 1,25(OH)₂D₃. Since then, numerous pre-clinical studies on the anti-cancer actions of vitamin D metabolites have shown promising results [3,7]. However, the mechanisms of anti-cancer properties of vitamin D metabolites remain to be fully elucidated. The current data suggest that a common mode of anti-cancer action of vitamin D and its metabolites is the reduction of cell proliferation by the interruption of the cell cycle. In addition, other mechanisms which have been reported include the promotion of cell death, in particular, apoptosis; and inhibition of tumor metastases and angiogenesis [3,4,8,9,10]. Here we will review the evidence from in vitro studies that investigate vitamin D and vitamin D metabolites on the cell cycle in cancer cell lines.

2. An Overview of Vitamin D Metabolism, Signaling and Functions in the Human Body 2.1. Vitamin D Metabolism

Vitamin D is a steroid hormone that regulates calcium and phosphate homeostasis. Vitamin D is endogenously produced in the skin where ultraviolet B radiation from sunlight converts 7-dehydrocholesterol to cholecalciferol (vitamin D3) [11]. Alternative sources include vitamin D fortified foods and pharmaceutical supplementation. Irrespective of its source, vitamin D precursors undergo two sequential hydroxylations to form the most active compound. Firstly, vitamin D is hydroxylated by the 25-hydroxylase enzyme (CYP2R1) in the liver to form 25-hydroxyvitamin D, and secondly, 25-hydroxyvitamin D is converted to the active compound by 1α-hydroxylase (CYP27B1) in the kidney to form 1,25-dihydroxyvitamin D (calcitriol) [12]. Both calcitriol and calcidiol are inactivated by renal 24-hydroxylase (CYP24A1) which forms an inactive water-soluble metabolite that is excreted in the bile [12]. The vitamin D metabolizing system (VDMS) consisting of activating (CYP2R1, CYP27B1) and inactivating (CYP24A1) vitamin D enzymes, and expression of vitamin D receptor (VDR) has also been described in selective tissue types, and allows for a narrow homeostatic control of vitamin D metabolism related to cell growth and metabolism at an autocrine/paracrine level.

2.2. Vitamin D Intracellular Signalling

Activated vitamin D mediates its actions by binding to the vitamin D receptor (VDR) in the cytoplasm of the target cell [11]. Once bound to the ligand, VDR couples to retinoid X receptor (RXR), and this trimeric complex then enters the nucleus [11]. The complex binds to vitamin D response elements (VDREs) within the nucleus. These are short 15 base pair DNA sequences often comprised of two directly repeated consensus AGGTCA sequences and are commonly located within a three kilobase region of the promoters of target genes [13].

2.3. Vitamin D’s Function in the Human Body

Vitamin D has numerous extra-skeletal actions. To date, VDR expression has been reported in healthy and cancerous extra-skeletal target tissue. The actions of calcitriol may directly or indirectly regulate as much as 5% of the human genome [14,15]. The literature best describes the function of vitamin D and its metabolites on optimal bone and mineral metabolism. However; the investigation of the extra-skeletal axis by calcitriol has expanded in the last two decades as evidenced by pre-clinical and clinical studies [3,4]. The growth-regulating actions of 1,25(OH)₂D₃ suggest potential therapeutic avenues for both the endogenous hormone and synthetic vitamin D analogs in the treatment of cancer [3], immune suppression, autoimmune diseases [16,17], and cardiovascular health [18]. In this review, the vitamin D metabolites are defined as the known endogenous bioactive vitamin D compounds, calcitriol and calcidiol, and other synthetic vitamin D analogs.

3. Regulation of the Cell Cycle 3.1. The Phases of the Cell Cycle

All eukaryote organisms grow by undergoing mitotic cell division. The process of cell growth is highly regulated and tightly controlled by the cell cycle. The cell cycle consists of four sequential phases (Figure 1) [19]. Firstly, during the gap1 (G1) phase, the cell is most sensitive to growth signals, and it prepares for cell division by increasing transcription and translation of essential DNA synthesis proteins [19]. Next, the cell enters the S phase where DNA is replicated. Then, the cell progresses to the second gap phase (G2), which allows the cell to prepare the necessary mitotic machinery [19]. Finally, mitosis (M) is initiated, where chromosomes segregate, and the cell divides into two daughter cells. Upon division, the two daughter cells may enter a temporary, quiescent G0 phase, or begin another round of cell cycling, depending on the tissue milieu [20]. The G0 phase of the cell cycle represents a quiescent state in which the cell has transiently withdrawn from the cell cycle and is not actively dividing [19]. The G0 phase is the result of either external stimuli instructing the cell not to divide or decreased mitogen signaling from the tissue environment. Cells in the G0 phase may re-enter the cell cycle by appropriate mitogenic signaling of D-type cyclins [19].

3.2. Cyclin-Dependent Kinases and Cyclins Drive the Cell Cycle

Cyclin-dependent kinases (CDKs) are a family of heterodimeric serine/threonine protein kinases that enable the cell to progress sequentially in the cell cycle [20]. CDKs are constitutively expressed catalytic subunits that are activated when bound to their respective cognate cyclin partners [20]. The substrate specificity of the cyclin-CDK complexes is thus dependent on the specific pairing of each cyclin to its cognate CDK [20]. Cyclins are regulatory subunits that are expressed in a cyclical manner throughout the cell cycle [19,20]. Once bound, CDK-cyclin complexes monitor transitions through the phases of the cell cycle. For example, the cyclin D-CDK4 and cyclin D-CDK6 complexes mediate the progression through G1, and the cyclin E-CDK2 complex drives the cell through the restriction point (R point) of G1 [19]. The regulatory checkpoints in the cell cycle are illustrated in Figure 1. Once the cell passes the R point in late-stage G1, it is no longer sensitive to external growth signals and is committed to mitosis [21]. The cell cycles through the S phase by cyclin A-CDK2 complexes. Cyclin B-CDK1 complexes in G2 regulate entry into mitosis [21]. Therefore, selective CDK enzymes are only activated at particular points in the cycle during periods of abundant expression of their cognate regulatory cyclin partner.

3.3. The Activation and Inactivation of Cyclin/CDK Complexes Determine the Progression of the Cell Cycle

In mammalian cells, cyclin/CDK complexes require further activation by post-translational modification before they mediate cell cycle progression. Firstly, cyclin activating kinases (CAKs)—a trimolecular complex of Cdk7, cyclin H, and Mat1—phosphorylate Thr160 and secondly, Cdc25 phosphatase dephosphorylates Thr14 and Tyr15 to form an active complex [21]. In contrast, CDKs are inhibited when Thr14 and Tyr15 are phosphorylated by Wee1 and Mik1 kinases, and when bound to cyclin-dependent kinase inhibitors (CDKIs) [21].

CDK inhibitors (CDKIs) finely modulate cell cycling by temporarily blocking the activity of CDK-cyclin complexes [20]. CDKI expression is induced by external stimuli or internal stressors. A wide range of cell cycle inhibitory stimuli exist [20].

The two families of CDKIs are the INK4 and the CYP/Kip inhibitors, and respectively prevent the binding of CDKs to their cognate cyclins, or disrupt activated cyclin-CDK complexes, thereby causing transcriptional inhibition [20,21]. Firstly, INK4 CDKIs are INhibitors of CDK4 and consist of members: p16^INK4A, p15^INK4B, p18^INK4C, and p19^INK4D. INK4 inhibitors specifically prevent the binding of CDK4 and CDK6 to cyclin D but do not bind other CDKs [20,21]. Secondly, the CIP/KIP family consists of three members: p21^CIP1 (Cdk Interacting Protein 1), p27^KIP1 (Kinase Inhibitory Protein 1), and p57^KIP2 (Kinase Inhibitory Protein 2), which bind CDK2 activity. In this way, CDKIs provide fine regulation of control between the phases of the cell cycle.

3.4. Cell Cycle Entry and the G1-S Checkpoint

Mitogenic signals converge on cyclin D-CDK4 and result in the progression of the cell to the restriction point [22]. Cyclin D-CDK4, cyclin D-CDK6, and cyclin E-CDK2 complexes enable progression through the restriction point of the G1 phase of the cell cycle [23]. Once the cell traverses the G1/G0 restriction point, it is committed to cell division and will undergo mitosis [24]. The restriction point is the gatekeeper of the cell cycle [22,25]. For cells to pass the G1/G0 restriction point, compliance with two criteria must be met. Firstly, cyclin E expression requires upregulation, and secondly; the retinoblastoma protein (pRB) must be hyperphosphorylated [26]. These two conditions facilitate the binding of Cdk2 to cyclin E, which then phosphorylates pRB. The hyperphosphorylated pRB then dissociates from E2F transcription factors [26], resulting in free E2F transcription factors that activate cell cycle regulators (cyclins A and E) and DNA synthesis machinery (Mcm, Cdc6, and Cdt1) thus, permitting DNA replication [26].

The pRB pocket protein family includes three members: pRB, p107, and p130, and they are named after a conserved binding pocket region through which pRB, p107, and p130 bind cellular factors such as the E2F family of transcription factors and viral oncoproteins [22]. pRB is a negative regulator of the cell cycle through its repressive interaction with E2F transcription factors. pRB blocks E2F activity in two distinct ways [22]. Firstly, the pRB-E2F complex is sufficient to prohibit the transcriptional activity of E2F, and secondly, the pRb-E2F complex also recruits histone deacetylases (HDACs) to promoter regions of E2F-responsive genes [21,22]. HDACs remove highly charged acetyl moieties from core histones (H3 and H4), and this results in a compacted chromatin architecture between nucleosomes [22] and restricted access of transcription factors to their cognate promoters. The outcome of this pRB-E2F-HDAC repressor complex is a reduction in the transcription of S phase genes [21,22].

C-MYC Regulates Numerous Genes in the Cell Cycle

The MYC oncogene family consists of C-MYC, MYCN, and MYCL, which code for the oncoproteins C-MYC, N-MYC, and L-MYC, respectively [27]. These oncoproteins belong to a family of “super transcription factors” which regulate as much as 15% of the human genome [27] involved in cell proliferation, differentiation, metabolism, cell growth, and apoptotic cell death [28,29]. MYC family of proteins consists of highly conserved motifs, and MYC binds to DNA by a basic-region/helix-loop-helix/leucine-zipper (BR/HLH/LZ) motif at the C terminus [28]. The MYC transcription factors recognize and bind to E-box sequences (5′-CACGTG-3′) that are located in the transcriptional regulatory region of target genes, and recruit additional transcription factors [28].

MYC expression is tightly controlled at transcriptional and post-transcriptional levels in healthy cells; however, MYC expression is frequently dysregulated in human cancers [1,27]. C-MYC suppressors the expression of cell cycle inhibitors, such as p15, p21, p27, and GADD-34, -45 and -153 expression [30]. These cell cycle inhibitors prevent unwarranted progression of the G1 phase. Therefore, by decreasing CDKI expression, MYC promotes cell cycle progression and cellular division [31] in pre-malignant and malignant cells and enhances tumor growth and development [32].

However, MYC is considered a double face transcription factor: MYC overexpression promotes cell proliferation in malignancy but also concomitantly sensitizes healthy cells to apoptosis [32]. Healthy cells respond to elevated MYC levels by initiating apoptosis, whereas transformed cells lose their sensitization to MYC levels and often respond to elevated MYC levels by inducing cell proliferation [32,33].

3.5. G2/M Checkpoint

Once the cell in the S phase has faithfully replicated its genome, it enters the G2 phase [21]. During this short growth phase, the cell synthesizes requisite proteins for mitosis [21]. The primary objective of the G2 checkpoint is to halt the cell cycle in the presence of DNA damage [21]. Therefore, DNA lesions are not passed to the daughter cells during mitosis. When DNA is damaged, sensor proteins, such as checkpoint kinase 1 (Chk1) and checkpoint kinase 2 (Chk2), initiate the DNA damage response and induce cell cycle arrest [34]. Traverse of G2/M checkpoint is not primarily regulated by CDKIs [35], but instead is controlled by cyclin activating kinase (CAK) [21]. DNA lesions incurred during the S phase are sensed by ATR/Chk1 and ATM/Chk2 pathways and halt the cycle by removing CDK-cyclin activators, Cdc25 phosphatase [21].

4. The Effect of Vitamin D Metabolites on the Cell Cycle Vitamin D derivatives inhibit the progression of the cell cycle in various cell and tumor types. To date, the anti-proliferative action of vitamin D derivatives has been well established in malignant keratinocytes, and this action has also been well studied in breast and prostate cancer cells. The best-described direct action of vitamin D on cell cycle regulators is the role of vitamin D in the G1/G0 cell cycle arrest. The G1/G0 cell cycle arrest is predominantly mediated by the upregulation of CDKIs p21 and p27. The mechanisms of p21 and p27 upregulation by calcitriol are varied. This section will explore the role of vitamin D and its metabolites on p21 and p27 expression. Furthermore, other mechanisms of G1/G0 cell cycle arrest, such as inducing pRB expression and inhibition of C-MYC expression, will also be explored. Lastly, the role of calcitriol in arresting the cell at the G2/M checkpoint will also be discussed. 4.1. Upregulation of p21 and p27 by 1,25(OH)2D3

The upregulation of p21 and p27 CDKIs in numerous types of cells treated with vitamin D is frequently documented within in vitro studies (Table 1). Considering the importance of CDKs in driving the cell cycle, it is understandable that an increase in CDKI targeting CDK2 (complexed to cyclin D, E, or A) halts the cell cycle.

4.1.1. Mechanisms of p21 Upregulation by 1,25(OH)₂D₃

At a genomic level, 1,25(OH)₂D₃ increases the expression of p21 (Figure 2). A functional VDRE has been identified in the p21 promoter region. This enables direct regulation of p21 transcription by VDR. p21 is upregulated in cells treated with vitamin D metabolites [56]. Functional VDRE in the p21 promoter has been reported in prostate cancer [46,57], breast cancer [36,38,58], and parathyroid cancer cells [59]. Therefore, VDR binding to VDRE at the p21 promoter region enhances p21 transcription and induces cell cycle arrest at G₁/G₀.

Within in vitro cell differentiation models, such as myeloid leukemia HL60 and SCC cell lines, p21 showed variable response to calcitriol treatment. In addition to cell cycle arrest, p21 is also associated with cellular differentiation. Despite the presence of VDRE at the p21 gene promoter, studies on calcitriol treatment reveal cell-specific results. In HL60 cells, calcitriol increased p21 expression and induced G1/G0 cell cycle arrest [60]. However, in SCC cells, which are malignant counterparts of keratinocytes, 1,25(OH)₂D₃ inhibited cell growth but also decreased p21 expression [61]. In the myelomonocytic cell line, U937, p21 mRNA was significantly increased two hours after treatment with 1,25(OH)₂D_3, and this resulted in a G1 arrest [56]. However, assessment of the cell cycle 24 and 48 h after treatment identified that this initial quick response was not sustained [62]. The initial G1 arrest was followed by a “proliferative burst.” This may suggest that it is unlikely that p21 is solely responsible for the G1/G0 arrest in leukemia. These findings suggest that the role of vitamin D in p21 upregulation and subsequent cell cycle arrest or differentiation remains unclear in healthy and malignant keratinocytes.

In addition, p21 is also transcriptionally regulated by p53 protein [63]. This p53-p21 axis is regulated by multiple p53 binding regions located in the p21 promoter [64]. The p53 tumor-suppressor protein is activated by cellular stressors, for example, oncogene activation [63]. This transcription factor can activate or repress target genes directly by the recruitment of p53 tetramers to response elements on target gene promoter sites to cause tumor suppression by affecting cell cycling and apoptosis [63]. The direct activation of cell cycle arrest proteins by p53 include the upregulation of p21 CDKI [65]. In addition, indirect p53-mediated repression of other tumor-suppressor genes can be affected by the direct p53-dependent increase of p21 expression [66]. Thus, p53 can cause cell cycle disruption directly or indirectly via p21, which recruits E2F4 repression complexes to target promoters of genes involved in cell cycle progression. 1,25(OH)₂D₃ has been shown to regulate the p53-p21 axis. Cross-talk between VDR and p53 family members is important in tumor suppression [67]. For example, in gastric cancer cells, multiple sites for p53 binding are present in the promoter region of p21 and p53 co-operates with VDR to regulate the transactivation of p21 mRNA [68]. Mechanisms that are important in the cross-talk between vitamin D and p53 signaling include direct regulation of VDR by p53 [69]; the regulation of cutaneous vitamin D synthesis by p53 [70] and the binding of p53 to highly conserved intron sequences of the VDR gene [71]. Additionally, vitamin D metabolites can regulate murine double minute (MDM2) gene independent of p53 [72], which encodes an E3 ubiquitin ligase that degrades p53 by the 26S proteosome [73] which can regulate p53-induced cell death. Cell cycle arrest in cancer cell lines has demonstrated p53 dependent and p53 independent mechanisms.

4.1.2. Mechanisms of p27 Upregulation by 1,25(OH)₂D₃

In contrast to the genomic regulation of p21, calcitriol regulates p27 at a protein level. In 1996, Wang et al. were the first to report an increase in p27 and subsequent G1 block after 1,25(OH)₂D₃ treatment in HL60 cells [43]. In later experiments, the same group demonstrated reduced Cdk6 and Cdk2 kinase activity and p27 upregulation [74] which induced a G1 cell cycle arrest. In addition, p27 silencing by siRNA reversed the G1 block in HL60 cells [75]. Taken together, these findings demonstrate that p27 has a crucial role in G₁/G₀ cell cycle arrest in HL60 cells. To date, several different mechanisms of 1,25(OH)₂D₃ regulation of p27 have been reported (Figure 2).

The dominant mechanism of p27 regulation by vitamin D is by proteosome-dependent protein degradation. For example, in both ovarian [39] and prostate [76] cancer cell lines, 1,25(OH)₂D₃ treatment did not change p27 mRNA levels, but reduced mRNA expression of p45/Skp2 and Cks1 which are responsible for p27 protein ubiquitinylation and degradation [77]. The net effect is that there is decreased ubiquitin tagging of p27 protein and subsequent protein degradation, ultimately leading to increased p27 stabilization [77,78]. This mechanism of p27 stabilization was also observed in acute promyelocytic leukemia cells [79] and human hepatoma cells [80]. By protein stabilization, 1,25(OH)₂D₃ may increase p27 expression and sustain the G1 cell cycle block as p27 regulates cyclin E-CDK2 activity [81].

In addition to the aforementioned post-translational mechanism of p27, 1,25(OH)₂D₃ also mediates p27 by two transcriptional mechanisms. Firstly, VDR enhanced the expression of transcription factors responsible for the increase in p27 gene expression, Sp1, and NFY, in SW620 colon cancer cell line and LNCaP prostate cancer cell line [82]. Secondly, calcitriol has been observed to induce Akt expression and thereby indirectly regulate p27 gene expression [83]. Akt promotes forkhead transcription factors, such as AFX (FOXO4), which is required for p27 gene expression [84,85]. Therefore, VDR indirectly increases p27 expression at the genomic level by several key transcription factors.

Furthermore, 1,25(OH)₂D₃ regulates p27 expression by decreasing microRNA 181a expression, and it has been reported in myeloid cells [86]. MicroRNAs repress protein expression at the post-transcriptional level by binding to mRNA transcripts and blocking access to protein synthesis machinery [87]. Wang et al., reported a decrease in expression of miRNA 181a in HL60 and U937 cells when treated with 1,25(OH)₂D₃ in a dose- and time-dependent manner [86] which decreased p27 mRNA whereas cells transfected with pre-miR181a constructs abrogated the 1,25(OH)₂D₃-induced upregulation of p27 [86].

Hence, several mechanisms of p27 regulation have been reported, and data suggests a cell-specific response to calcitriol treatment. Additional studies on p27 regulation by vitamin D metabolites in other cell lines and cancer cell types are needed to fully elucidate the mechanism of p27 upregulation by vitamin D metabolites in cancer. 4.2. The Effect of 1,25(OH)₂D₃ on pRB Expression

By increasing CDKIs p21 and p27, 1,25(OH)₂D₃ directly decreases the action of downstream targets, cyclin D-CDK4/6, and cyclin E-CDK2 complexes, respectively. The result of these perturbations of cell cycle regulatory proteins is that pRB remains in a hypophosphorylated state complexed to E2F [21]. In this way, 1,25(OH)₂D₃ prevents the transcriptional activity of E2F transcription factors and denies entry into the S phase of the cell cycle. In addition to this indirect role of 1,25(OH)₂D₃ on E2F expression, 1,25(OH)₂D₃ can increase the expression of pRB in myeloid leukemia cells approximately 10 h after vitamin D treatment [88], although the mechanism of pRB upregulation is currently unknown. The increased abundance of pRB sequesters any free E2F factors and inhibits E2F, which results in a G1/G0 cell cycle arrest [21].

4.3. Downregulation of C-MYC by 1,25(OH)₂D₃

In addition to its regulation of pRB, 1,25(OH)2D3 has demonstrated downregulation of the prominent pRB target gene, C-MYC. Several studies have demonstrated a significant reduction of C-MYC expression after 1,25(OH)2D3 treatment in colon [89,90] and prostate cancer cell lines [48,91]. These studies collectively demonstrate that decreased C-MYC expression is associated with G1/G0 arrest, followed by cell differentiation.

The mechanism for C-MYC repression by calcitriol seems to be cell-specific. In prostate cancer C4-2 cells, 1,25(OH)₂D₃ treatment reduced C-MYC mRNA by 50% and resulted in a significant reduction in C-MYC protein [48]. In SW480 colon cancer cells, 1,25(OH)₂D₃ promoted VDR/β-catenin interaction and prevented the β-catenin translocation into the nucleus [92]. β-catenin is important for C-MYC gene transcription. Thus, 1,25(OH)₂D₃ may indirectly inhibit C-MYC gene transcription via the APC/β-catenin pathway. C-MYC therefore appears to be an important target of calcitriol in policing cancer cells to cause G1/G0 arrest.

4.4. Role of 1,25(OH)₂D₃ in G2/M Cell Cycle Arrest

Currently, there is limited evidence of the induction of G2/M arrest by 1,25(OH)₂D₃, with the general consensus that G1/G0 cell cycle arrest is the primary target of vitamin D metabolites. However, there are a selected number of studies that have shown G2/M cell cycle arrest in cells treated with 1,25(OH)₂D₃. In HL60 myeloid leukemia cells treated with 1,25(OH)₂D₃, a G2/M arrest was evident in cell cycle analyses [93,94]. Only one study identified a mechanistic link in 1,25(OH)₂D₃-induced G2/M cell cycle arrest. In ovarian cancer cell lines, 1,25(OH)₂D₃ increased GADD45α (Growth arrest and DNA-Damage-Inducible alpha) and subsequently induced cell cycle arrest at the G2/M phase [95]. Interestingly, a functional VDRE was identified in an exonic enhancer region of the GADD45α gene [95]; however, no additional studies exploring GADD45α, and this VDRE in other cancer cell lines, have been identified.

4.5. Epigenetic Marks of the Vitamin D Metabolizing System in Cancer Cell Lines May Alter Cell Arrest

The VDMS, at an autocrine level, controls genes that regulate cell proliferation and cell death. CpG islands span the promoters of CYP2R1, CYP24A1, and VDR, while a CpG island is located within the CYP27B1 gene locus [96].

Liganded VDR signaling has been shown to be attenuated in cancer [96]. Epigenetic silencing of the VDR can be mediated by hypermethylation in various types of cancerous cells, including breast and choriocarcinoma tumor cell lines [97]. The pattern of hypermethylation of the VDR promoter region is inconsistent in cancer cell lines; for example, colonic cancer cells do not reveal a hypermethylated status in the VDR promoter region [98,99]. Therefore, the decreased sensitivity to calcitriol may be caused by epigenetic corruption of the VDR in cancer cell lines. In addition, epigenetic marks can reduce sensitivity to vitamin D metabolites in clinical trials [100] by increased methylation of VDR promoter and associated VDR expression in cancer [101].

In addition, expression of CYP27B1 is often downregulated in cancer which may be accounted for by CpG islands also present in the gene locus. In breast cancer cell lines, the CYP27B1 gene showed reversible DNA hypermethylation which caused CYP27B1 silencing. Similarly, Novakovic et al. [102] demonstrated hypermethylation of the CYP27B1 gene promoter region in the choriocarcinoma cell lines, BeWo and JAR. Inhibitors of methylation in prostate cancer cell lines increased CYP27B1 expression [103] supporting the importance of epigenetic marking of CYP27B1 in autocrine calcitriol synthesis. Hypermethylation of CYP27B1, therefore, may be associated with the decreased local synthesis of calcitriol from calcidiol substrate, and potentially decreased cell growth, differentiation, and perturbed cell cycling.

The regulation of CYP24A1 by DNA methylation demonstrates cell-specificity. Hypermethylation of the CYP24A1 promoter region, with associated epigenetic silencing of CYP24A1 expression, has been identified in prostate cancer cell line PC3 [104] and tumor-derived endothelial cells (TDEC) [105]. The hypomethylation of the CYP24A1 promoter in colon adenocarcinoma associated with significantly elevated CYP24A1 expression [106] has also been observed. The catabolic role of CYP24A1 in these studies may support the disruption of calcitriol-mediated cell arrest in tumorigenic cell lines.

Collectively, these studies demonstrate that the epigenetic regulation of gene expression of the VDMS is altered in cancer mainly by DNA hypermethylation. This altered state leads to abnormal protein expression levels, which may favor carcinogenesis in a cell-specific manner. Therefore, autocrine regulation of the VDMS may impact G1/G0 and G2/M cell cycle arrest in cell lines and in clinical studies. Epigenetic alteration of the VDMS may also provide insight into the discordant alignment between in vitro cancer studies and clinical studies. Exploration of epigenetic marks of the VDMS on cell cycle regulators may thus provide a possible explanation of the inhibition of cell arrest in cancer patients. Future studies can also target altered autocrine activation of vitamin D precursors, autocrine catabolism of activated vitamin D hormone, and abrogated signaling of liganded VDR, and their collective association with perturbations of vitamin D-induced cell cycle arrest. 5. Conclusions Vitamin D metabolites target numerous cell cycle regulators in order to arrest the cell cycle. G1/G0 arrest is the primary mode of cell cycle arrest described within in vitro cell lines treated with vitamin D compounds, although a few studies have described G2/M cell cycle block with vitamin D treatments. Within the G1/G0 arrest, several studies have demonstrated the upregulation of CDKIs, p21, and p27, while few studies have also shown decreased C-MYC expression and increased pRB expression. In addition, the mechanisms of cell cycle arrest by vitamin D demonstrate cell specificity. More data are needed to fully elucidate the mechanistic action of vitamin D on cell cycle proteins, especially to resolve the role of vitamin D metabolites’ anti-cancer actions in pre-clinical and clinical studies. The altered vitamin D metabolizing system by epigenetic marks may partly account for dysregulated vitamin D activation and signaling, and studies exploring this topic may provide insight into the perturbations of cell cycle arrest in cancer. The exploitation of cell arrest mechanisms by vitamin D and its analogs is a promising though currently unresolved therapeutic target.

Figure 1. The cell cycle phases and key regulatory checkpoints in eukaryotes. Cells cycle through Gap1 (G1), Gap2 (G2), DNA synthesis (S), and mitosis (M) phases. Cells may temporarily exit the cell cycle at the G1/G0 transition point in response to high cell density or mitogen deprivation. Three cell cycle checkpoints regulate sequential progression between the phases. Regulatory proteins (cyclins) pair with specific catalytic subunits (cyclin-dependent kinases) to form an active kinase that drives cell progression through the restriction point (R). (Abbreviations: G1: Gap1; G2: Gap2; S: Synthesis phase; M; Mitosis; CDK: cyclin-dependent kinase). (Source: personal collection)

Figure 2. Calcitriol upregulates p21 and p27 expression in the G1 phase and prevents cell cycle progression to the S phase [3]. Calcitriol (1,25(OH)2D3) increases the expression of CDK inhibitors (CDKIs), p21 and p27, by numerous mechanisms. p21 expression is increased by stimulation of liganded VDR signaling. p27 expression is increased by signaling transcription factors; inhibition of p27 protein degradation by S-phase kinase-associated protein 2 (Skp2); and enhanced p27 translation by abrogated microRNA-181a expression. The collective outcome of the increased CDKI expression is suppression of cyclin-CDK complex formation, which inhibits the formation of hyperphosphorylated retinoblastoma protein (pRB). The unphosphorylated pRB thus is able to form a repressor complex with histone deacetylase (HDAC) and E2F transcription factor (E2F), which prevents the progression of cancer cells in the G1 phase to the S phase, inhibiting S phase gene expression, and thus causing G0/G1 cell cycle arrest. (Source: personal collection).

Tissue of Origin	Author	Cell Line/s	Treatment (Concentration)	Mechanism of Action	Conclusion
Breast cancer	S. Jensen et al. [36]	MCF-7	1,25(OH)2D3 (100 nM)	1,25(OH)2D3 increased tumor suppressor pRB expression and decreased expression of CDK 4, 6 and 2 and increased expression of CDKI p21. 1,25(OH)2D3 treatment also decreased C-MYC oncoprotein expression.	G0/G1 cell cycle arrest
	Chiang et al. [37]	MCF-7	1. MART-10 (1 nM, 10 nM and 100 nM) 2. 1,25(OH)2D3 (10 nM, 100 nM and 1000 nM)	1,25(OH)2D3 and MART-10 induced p21 and p27 CDKI expression and induced G0/G1 cell cycle arrest.	G0/G1 cell cycle arrest
	Wu et al. [38]	MCF-7 E MCF-7 L BT20 T47D ZR75	EB1089 (0.01 nM, 0.1 nM, 1 nM, 10 nM)	EB1089 induced p21 expression and increased p21-CDK2 complex formation, which caused decreased DNA synthesis in all cell lines except EB1089-resistant MCF-7 L cell line. p27 was increased by EB1089 treatment in BT20 and ZR75 cell lines only.	Cell-dependent G0/G1 cell cycle arrest
Ovarian cancer	Li et al. [39]	2008 CAOV3	1,25(OH)2D3 (100 nM)	1,25(OH)2D3 decreased the expression of cyclin E and Skp2, which resulted in decreased CDK2-cyclin E activity and decreased p27 phosphorylation, respectively. The decreased p27 phosphorylation prevents p27 protein degradation, allowing it to accumulate in the cell and induce G1/G0 cell cycle arrest.	G0/G1 cell cycle arrest
	Li et al. [39]	OVCAR3	1,25(OH)2D3 (100 nM)	VDR stabilized intracellular p27 protein levels by decreasing the activity of the Skp2 proteosome, which is responsible for p27 degradation.	G0/G1 cell cycle arrest
Human head and neck squamous cells	Akutsu et al. [40]	SCC25	EB1089 (1 nM, 10 nM and 100 nM)	Calcitriol analogue EB1089 upregulated growth repair damage factor GADD45α.	G0/G1 cell cycle arrest
	Salehi-Tabar et al. [41]	SCC25	1,25(OH)2D3 (100 nM)	1,25(OH)2D3 decreased C-MYC expression and increased C-MYC repressor MAD1 levels. The increased MAD1 prevented C-MYC’s transcriptional regulation of target genes and inhibited cell proliferation.	G0/G1 cell cycle arrest
Thyroid cancer	Liu et al. [42]	PTC-1 NPA WRO	1. 1,25(OH)2D3 (0.1 nM, 1 nM, 10 nM, 100 nM and 1000 nM) 2. EB1089 (0.1 nM, 1 nM, 10 nM, 100 nM and 1000 nM)	1,25(OH)2D3 and EB1089 increased p27 expression and decreased Skp2 expression, which allowed p27 to accumulate and induce G0/G1 cell cycle arrest.	G0/G1 cell cycle arrest
Promyelocytic leukaemia	Wang et al. [43]	HL60	1,25(OH)2D3 (1 nM and 100 nM)	1,25(OH)2D3 induced p12 and p27 mRNA and protein expression and induced G0/G1 cell cycle arrest.	G0/G1 cell cycle arrest
Prostate cancer	Washington et al. [44]	C4-2	1,25(OH)2D3 (100 nM)	1,25(OH)2D3 decreased C-MYC expression and induced G1 cell cycle arrest in a pRB-independent manner.	G0/G1 cell cycle arrest
	Bao et al. [45]	LNCaP CWR22R PC-3 DU145	1,25(OH)2D3 (100 nM)	1,25(OH)2D3 increased pRB and p27 expression and decreased CDK2 expression, thereby preventing entry into the S phase.	G0/G1 cell cycle arrest
	Boyle et al. [46]	LNCaP	1,25(OH)2D3 (10 nM)	Calcitriol upregulated the mRNA and protein expression of insulin-like growth factor binding protein 3, which resulted in increased expression of p21 and induced a G0/G1 cell cycle arrest.	G0/G1 cell cycle arrest
	Flores et al. [47]	LNCaP	1,25(OH)2D3 (50 nM)	1,25(OH)2D3 decreased CDK2 activity leading to hypophosphorylation of pRB, which prevented entry into the S phase.	G0/G1 cell cycle arrest
	Rohan et al. [48]	LnCaP C4-2 RWPE-1	1,25(OH)2D3 (10 nM)	Downregulation of C-MYC mRNA and protein expression induced by 1,25(OH)2D3 treatment.	G0/G1 cell cycle arrest
Colorectal adenoma and carcinoma	Diaz et al. [49]	SW620 PC/JW HT29	1. 1,25(OH)2D3 (0.1 nM, 1 nM, 10 nM, 100 nM, 1000 nM) 2. EB1089 (0.1 nM, 1 nM, 10 nM, 100 nM, 1000 nM)	Calcitriol and analogue EB1089 increased cells in G1 in a p53- dependent manner.	G0/G1 cell cycle arrest
Pancreatic cancer	Li et al. [50]	HPDE6-C7 Panc-1	1,25(OH)2D3 (1 nM, 5 nM, 10 nM, 50 nM, 100 nM)	p21 expression was significantly increased in HPDE6-C7 cells but not in metastatic Panc-1 cells.	G0/G1 cell cycle arrest
	Petterson et al. [51]	AsPc-1 BxPc-3 T3M-4	1. EB1089 (50 nM) 2. CB1093 (50 nM)	EB1089 and CB1093 induced cell cycle arrest in all cell lines investigated in this study.	G0/G1 cell cycle arrest
	Schwartz et al. [52]	BxPC-3 Hs700T Hs766T AsPC-1	1. 1,25(OH)2D3 (100 nM) 2. 25(OH)D3 (100 nM or 2µM)	Increased expression of p21 and p27 proteins in BxPC-3, Hs700T and AsPC-1 cell lines only.	G0/G1 cell cycle arrest
Malignant pleural mesothelioma	Gesmundo et al. [53]	MeT-5A Msto-211H REN	1,25(OH)2D3 (1 nM, 10 nM, 50 nM and 100 nM)	Reduction in C-MYC expression and cyclin A, cyclin D1 and cyclin D2 which induced a G1/G0 cell cycle arrest.	G0/G1 cell cycle arrest
Malignant melanoma	Reichrath et al. [54]	IGR MelJuso MeWo SK-Mel-5 SK-Mel-25 SK-Mel-28 SM2	1. 1,25(OH)2D3 (100 nM) 2. 25(OH)D3 (100 nM) 3. EB1089 (100 nM)	Treatments induced a significant decrease in cell proliferation of MeWo, SK-Mel 28, and SM2 melanoma cell lines. In addition, IGR, MelJuso, SkMel5 and SK-Mel-25 cell lines demonstrated no significant change in cell growth.	Cell cycle not investigated; however, a significant decrease in cell proliferation was observed in a cell-specific manner.
	Spath et al. [55]	IR6 VAG 1007	1,25(OH)2D3 (50 nM)	1,25(OH)2D3 induced G1/G0 cell cycle arrest in IR6 cell line by p21 and p27 upregulation, and cyclin D downregulation. 1,25(OH)2D3 induced G2/M arrest in VAG cell line by decreased cyclin B1 expression. In 1007 melanoma cell line, 1,25(OH)2D3 increased cells in the proliferative compartments of the cell cycle (S-phase plus G2 phase) by increased cyclin A1, p21 and p27 expression.	Cell-specific cell arrest responses were observed to 1,25(OH)2D3 treatment.
	Liu et al. [56]	U937	1,25(OH)2D3 (100 nM)	1,25(OH)2D3 induced p21 mRNA expression in a p53-independent manner and 1,25(OH)2D3 induced p27 gene and protein expression.	1,25(OH)2D3 arrested cell proliferation and induced cell surface markers of cell differentiation.

Abbreviations: 1,25(OH)2D3, calcitriol; 25(OH)2D3, calcidiol; EB1089, Seocalcitol; CB1093, novel 20-epi-vitamin D3 analogue; MART-10 (19-nor-2α-(3-hydroxypropyl)-1α,25(OH)₂D₃; pRB, retinoblastoma protein.

Author Contributions

Conceptualization, R.P. and S.B.; writing-original draft preparation, S.B. and R.P.; writing-review and editing, R.P. and S.B.; visualization, R.P. and S.B.; supervision, R.P.; funding acquisition, R.P. All authors have read and agreed to the published version of the manuscript.

Funding

The authors would like to acknowledge funding from the South African Medical Research Council (SAMRC); funding number: A1A083.

Acknowledgments

The authors would like to acknowledge funding from the South African Medical Research Council (SAMRC). All figures in this publication were created with Biorender.com.

Conflicts of Interest

The authors declare no conflict of interest.

Abbreviations

CDK	Cyclin-dependent kinase
CDKI	Cyclin-dependent kinase inhibitor
CIP	Cdk Interacting Protein
Chk	Checkpoint kinase
G0 phase	Resting (quiescent) phase
G1 phase	Gap 1 phase
G2 phase	Gap 2 phase
GADD	Growth arrest and DNA-damage-inducible protein
HDAC	Histone deacetylase
KIP	Kinase Inhibitory Protein
M phase	Mitosis
MDM2	Murine Double Minute 2
pRB	Retinoblastoma protein
S phase	Synthesis
Skp2	S-phase kinase-associated protein 2
TDEC	Tumor-derived endothelial cells
VDR	Vitamin D receptor
VDRE	Vitamin D response element

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